Contouring with Uncertainty. - Rodolfo S. Allendes Osorio; Ken W. Brodlie (TPCG, 2008)

Uncertain Flow Visualization using LIC. - Rodolfo S. Allendes Osorio; Ken W. Brodlie (TPCG, 2009)

A Review of Uncertainty in Data Visualization. - Ken Brodlie; Rodolfo S. Allendes Osorio; Adriano Lopes (Expanding the Frontiers of Visual Analytics and Visualization, 2012)

CLINE: a web-tool for the comparison of biological dendrogram structures. - Rodolfo S. Allendes Osorio; Lokesh P. Tripathi; Kenji Mizuguchi (BMC Bioinform., 2019)

TargetMine 2022: a new vision into drug target analysis. - Yi-An Chen; Rodolfo S. Allendes Osorio; Kenji Mizuguchi (Bioinform., 2022)

Snaq: A Dynamic Snakemake Pipeline for Microbiome Data Analysis With QIIME2. - Attayeb Mohsen; Yi-An Chen; Rodolfo S. Allendes Osorio; Chihiro Higuchi; Kenji Mizuguchi (Frontiers Bioinform., 2022)

Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer. - Saransh Gupta; Haswanth Vundavilli; Rodolfo S. Allendes Osorio; Mari N. Itoh; Attayeb Mohsen; Aniruddha Datta; Kenji Mizuguchi; Lokesh P. Tripathi (IEEE J. Biomed. Health Informatics, 2022)