Combining Mutation and Gene Network Data in a Machine Learning Approach for False-Positive Cancer Driver Gene Discovery. - Jorge Francisco Cutigi; Renato Feijo Evangelista; Rodrigo Henrique Ramos; Cynthia de Oliveira Lage Ferreira; Adriane Feijo Evangelista; André C. P. L. F. de Carvalho; Adenilso Simão (BSB, 2020)

Topological Characterization of Cancer Driver Genes Using Reactome Super Pathways Networks. - Rodrigo Henrique Ramos; Jorge Francisco Cutigi; Cynthia de Oliveira Lage Ferreira; Adenilso da Silva Simão (BSB, 2021)

Causal Model Discovery in Cancer Guided by Cellular Pathways. - Rodrigo Henrique Ramos; Adenilso Simão; Mohammad Reza Mousavi 001 (CMSB, 2024)

Identifying Key Genes in Cancer Networks Using Persistent Homology. - Rodrigo Henrique Ramos; Yago Augusto Bardelotte; Cynthia de Oliveira Lage Ferreira; Adenilso da Silva Simão (CoRR, 2024)

Exploring the Influence of Gene Networks on Driver Gene Classification. - Paulo Henrique Ribeiro; Jorge Francisco Cutigi; Rodrigo Henrique Ramos; Cynthia de Oliveira Lage Ferreira; Adriane Feijo Evangelista; Adenilso da Silva Simão (J. Comput. Biol., 2025)