QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyploid species. - Jifeng Tang; Ben Vosman; Roeland E. Voorrips; C. Gerard van der Linden; Jack A. M. Leunissen (BMC Bioinform., 2006)

Large-scale identification of polymorphic microsatellites using an in silico approach. - Jifeng Tang; Samantha J. Baldwin; Jeanne M. E. Jacobs; C. Gerard van der Linden; Roeland E. Voorrips; Jack A. M. Leunissen; Herman van Eck; Ben Vosman (BMC Bioinform., 2008)

Genotype calling in tetraploid species from bi-allelic marker data using mixture models. - Roeland E. Voorrips; Gerrit Gort; Ben Vosman (BMC Bioinform., 2011)

The simulation of meiosis in diploid and tetraploid organisms using various genetic models. - Roeland E. Voorrips; Chris A. Maliepaard (BMC Bioinform., 2012)

polymapR - linkage analysis and genetic map construction from F1 populations of outcrossing polyploids. - Peter M. Bourke; Geert van Geest; Roeland E. Voorrips; Johannes Jansen; Twan Kranenburg; Arwa Shahin; Richard G. F. Visser; Paul Arens; Marinus J. M. Smulders; Chris Maliepaard (Bioinform., 2018)

FitTetra 2.0 - improved genotype calling for tetraploids with multiple population and parental data support. - Konrad Zych; Gerrit Gort; Chris A. Maliepaard; Ritsert C. Jansen; Roeland E. Voorrips (BMC Bioinform., 2019)

Detecting quantitative trait loci and exploring chromosomal pairing in autopolyploids using polyqtlR. - Peter M. Bourke; Roeland E. Voorrips; Christine A. Hackett; Geert van Geest; Johan H. Willemsen; Paul Arens; Marinus J. M. Smulders; Richard G. F. Visser; Chris Maliepaard (Bioinform., 2021)

Multiallelic models for QTL mapping in diverse polyploid populations. - Alejandro Thérèse Navarro; Giorgio Tumino; Roeland E. Voorrips; Paul Arens; Marinus J. M. Smulders; Eric van de Weg; Chris Maliepaard (BMC Bioinform., 2022)

PolyHaplotyper: haplotyping in polyploids based on bi-allelic marker dosage data. - Roeland E. Voorrips; Giorgio Tumino (BMC Bioinform., 2022)