CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis. - Yong Tang; Yingfeng Chen; Cheryl F. Lichti; Roger A. Hall; Kevin D. Raney; Steven F. Jennings (BMC Bioinform., 2005)

Simplifying MIREOT; a MIREOT Protege Plugin. - Josh Hanna; Chen Cheng; Alex Crow; Roger A. Hall; Jie Liu; Tejaswini Pendurthi; Trent Schmidt; Steven F. Jennings; Mathias Brochhausen; William R. Hogan (ISWC (Posters & Demos), 2012)

Maintaining the Drug Ontology: an Open-source, Structured Product Label API for the JVM. - Roger A. Hall; Josh Hanna; William R. Hogan (VDOS+DO@ICBO, 2013)

Developing a semantically rich ontology for the biobank-administration domain. - Mathias Brochhausen; Martin N. Fransson; Nitin Kanaskar; Mikael Eriksson; Roxana Merino-Martinez; Roger A. Hall; Loreana Norlin; Sanela Kjellqvist; Maria Hortlund; Umit Topaloglu; William R. Hogan; Jan-Eric Litton (J. Biomed. Semant., 2013)

XLPM: efficient algorithm for the analysis of protein-protein contacts using chemical cross-linking mass spectrometry. - Mihir Jaiswal; Nathaniel Crabtree; Michael A. Bauer 002; Roger A. Hall; Kevin D. Raney; Boris L. Zybailov (BMC Bioinform., 2014)