SPADEVizR: an R package for visualization, analysis and integration of SPADE results. - Guillaume Gautreau; David Pejoski; Roger Le Grand; Antonio Cosma; Anne-Sophie Beignon; Nicolas Tchitchek (Bioinform., 2017)

CytoBackBone: an algorithm for merging of phenotypic information from different cytometric profiles. - Adrien Leite Pereira; Olivier Lambotte; Roger Le Grand; Antonio Cosma; Nicolas Tchitchek (Bioinform., 2019)

SARS-CoV-2 viral dynamics in non-human primates. - António Gonçalves; Pauline Maisonnasse; Flora Donati; Mélanie Albert; Sylvie Behillil; Vanessa Contreras; Thibaut Naninck; Romain Marlin; Caroline Solas; Andres Pizzorno; Julien Lemaitre; Nidhal Kahlaoui; et al. (PLoS Comput. Biol., 2021)

Impact of variants of concern on SARS-CoV-2 viral dynamics in non-human primates. - Aurélien Marc; Romain Marlin; Flora Donati; Mélanie Prague; Marion Kerioui; Cécile Hérate; Marie Alexandre; Nathalie Dereuddre-Bosquet; Julie Bertrand; Vanessa Contreras; Sylvie Behillil; Pauline Maisonnasse; et al. (PLoS Comput. Biol., 2023)

Antiviral capacity of the early CD8 T-cell response is predictive of natural control of SIV infection: Learning in vivo dynamics using ex vivo data. - Bharadwaj Vemparala; Vincent Madelain; Caroline Passaes; Antoine Millet; Véronique Avettand-Fenoel; Ramsès Djidjou-Demasse; Nathalie Dereuddre-Bosquet; Roger Le Grand; Christine Rouzioux; Bruno Vaslin; Asier Sáez-Cirión; Jérémie Guedj; et al. (PLoS Comput. Biol., 2024)