The integration of a novice user interface into a professional modeling tool. - S. Ramakrishnan; Cindy E. Hmelo; Roger S. Day; William Shirey; Qingshou Huang (AMIA, 1998)

Collaborative scientific inquiry in a simulated laboratory. - Anandi Nagarajan; Cindy E. Hmelo; Roger S. Day (CSCL, 1999)

Contextualized questioning to scaffold learning from simulations. - Cindy E. Hmelo; Roger S. Day (Comput. Educ., 1999)

Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer. - Xinghua Lu; Milos Hauskrecht; Roger S. Day (Pacific Symposium on Biocomputing, 2004)

Challenges of biological realism and validation in simulation-based medical education. - Roger S. Day (Artif. Intell. Medicine, 2006)

Identifier mapping performance for integrating transcriptomics and proteomics experimental results. - Roger S. Day; Kevin K. McDade; Uma R. Chandran; Alex Lisovich; Thomas P. Conrads; Brian L. Hood; Vs Kumar Kolli; David Kirchner; Tracy Litzi; G. Larry Maxwell (BMC Bioinform., 2011)

A decision theory paradigm for evaluating identifier mapping and filtering methods using data integration. - Roger S. Day; Kevin K. McDade (BMC Bioinform., 2013)