Correction for intracranial volume in analysis of whole brain atrophy in multiple sclerosis: the proportion vs. residual method. - Michael P. Sanfilipo; Ralph H. B. Benedict; Robert Zivadinov; Rohit Bakshi (NeuroImage, 2004)

The relationship between whole brain volume and disability in multiple sclerosis: A comparison of normalized gray vs. white matter with misclassification correction. - Michael P. Sanfilipo; Ralph H. B. Benedict; Jitendra Sharma; Bianca Weinstock-Guttman; Rohit Bakshi (NeuroImage, 2005)

Independent contributions of cortical gray matter atrophy and ventricle enlargement for predicting neuropsychological impairment in multiple sclerosis. - Ayda Tekok-Kilic; Ralph H. B. Benedict; Bianca Weinstock-Guttman; Michael G. Dwyer; Dominic Carone; Bhooma Srinivasaraghavan; Viritha Yella; Nadir Abdelrahman; Frederick Munschauer; Rohit Bakshi; Robert Zivadinov (NeuroImage, 2007)

Incorporating Domain Knowledge Into the Fuzzy Connectedness Framework: Application to Brain Lesion Volume Estimation in Multiple Sclerosis. - Mark A. Horsfield; Rohit Bakshi; Marco Rovaris; Maria Assunta Rocca; V. S. R. Dandamudi; Paola Valsasina; Elda Judica; F. Lucchini; Charles R. G. Guttmann; Maria Pia Sormani; Massimo Filippi (IEEE Trans. Medical Imaging, 2007)

3 T MRI relaxometry detects T2 prolongation in the cerebral normal-appearing white matter in multiple sclerosis. - Mohit Neema; Daniel Goldberg-Zimring; Zachary D. Guss; Brian C. Healy; Charles R. G. Guttmann; Maria K. Houtchens; Howard L. Weiner; Mark A. Horsfield; David B. Hackney; David C. Alsop; Rohit Bakshi (NeuroImage, 2009)

Rapid semi-automatic segmentation of the spinal cord from magnetic resonance images: Application in multiple sclerosis. - Mark A. Horsfield; Stefania Sala; Mohit Neema; Martina Absinta; Anshika Bakshi; Maria Pia Sormani; Maria Assunta Rocca; Rohit Bakshi; Massimo Filippi (NeuroImage, 2010)

Using multiple imputation to efficiently correct cerebral MRI whole brain lesion and atrophy data in patients with multiple sclerosis. - Alicia S. Chua; Svetlana Egorova; Mark C. Anderson; Mariann Polgar-Turcsanyi; Tanuja Chitnis; Howard L. Weiner; Charles R. G. Guttmann; Rohit Bakshi; Brian C. Healy (NeuroImage, 2015)

The effect of intramuscular interferon beta-1a on spinal cord volume in relapsing-remitting multiple sclerosis. - Sheena L. Dupuy; Fariha Khalid; Brian C. Healy; Sonya Bakshi; Mohit Neema; Shahamat Tauhid; Rohit Bakshi (BMC Medical Imaging, 2016)

Power estimation for non-standardized multisite studies. - Anisha Keshavan; Friedemann Paul; Mona K. Beyer; Alyssa H. Zhu; Nico Papinutto; Russell T. Shinohara; William Stern; Michael Amann; Rohit Bakshi; Antje Bischof; Alessandro Carriero; Manuel Comabella; et al. (NeuroImage, 2016)

OptiC: Robust and Automatic Spinal Cord Localization on a Large Variety of MRI Data Using a Distance Transform Based Global Optimization. - Charley Gros; Benjamin De Leener; Sara M. Dupont; Allan R. Martin; Michael G. Fehlings; Rohit Bakshi; Subhash Tummala; Vincent Auclair; Donald G. McLaren; Virginie Callot; Michaël Sdika; Julien Cohen-Adad (MICCAI (2), 2017)

MIMoSA: An Approach to Automatically Segment T2 Hyperintense and T1 Hypointense Lesions in Multiple Sclerosis. - Alessandra M. Valcarcel; Kristin A. Linn; Fariha Khalid; Simon N. Vandekar; Shahamat Tauhid; Theodore D. Satterthwaite; John Muschelli; Rohit Bakshi; Russell T. Shinohara (BrainLes@MICCAI (1), 2018)

Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. - Charley Gros; Benjamin De Leener; Atef Badji; Josefina Maranzano; Dominique Eden; Sara M. Dupont; Jason Talbott; Ren Zhuoquiong; Yaou Liu; Tobias Granberg; Russell Ouellette; Yasuhiko Tachibana; et al. (CoRR, 2018)

Automatic spinal cord localization, robust to MRI contrasts using global curve optimization. - Charley Gros; Benjamin De Leener; Sara M. Dupont; Allan R. Martin; Michael G. Fehlings; Rohit Bakshi; Subhash Tummala; Vincent Auclair; Donald G. McLaren; Virginie Callot; Julien Cohen-Adad; Michaël Sdika (Medical Image Anal., 2018)

Multiple Sclerosis Lesion Segmentation with Tiramisu and 2.5D Stacked Slices. - Huahong Zhang; Alessandra M. Valcarcel; Rohit Bakshi; Renxin Chu; Francesca Bagnato; Russell T. Shinohara; Kilian Hett; Ipek Oguz (MICCAI (3), 2019)

Quantifying neurologic disease using biosensor measurements in-clinic and in free-living settings in multiple sclerosis. - Tanuja Chitnis; Bonnie I. Glanz; Cindy Gonzalez; Brian C. Healy; Taylor J. Saraceno; Neda Sattarnezhad; Camilo Diaz-Cruz; Mariann Polgar-Turcsanyi; Subhash Tummala; Rohit Bakshi; Vikram Bajaj; David Ben Shimol; et al. (npj Digit. Medicine, 2019)

Robust Multiple Sclerosis Lesion Inpainting with Edge Prior. - Huahong Zhang; Rohit Bakshi; Francesca Bagnato; Ipek Oguz (MLMI@MICCAI, 2020)

Intensity warping for multisite MRI harmonization. - Julia Wrobel; M. L. Martin; Rohit Bakshi; Peter A. Calabresi; M. Elliot; David R. Roalf; Ruben C. Gur; Raquel E. Gur; Roland G. Henry; Govind Nair; Jiwon Oh; Nico Papinutto; et al. (NeuroImage, 2020)

Author Correction: Ensemble learning predicts multiple sclerosis disease course in the SUMMIT study. - Yijun Zhao; Tong Wang; Riley Bove; Bruce Cree; Roland Henry; Hrishikesh Lokhande; Mariann Polgar-Turcsanyi; Mark Anderson; Rohit Bakshi; Howard L. Weiner; Tanuja Chitnis (npj Digit. Medicine, 2020)

Ensemble learning predicts multiple sclerosis disease course in the SUMMIT study. - Yijun Zhao; Tong Wang; Riley Bove; Bruce Cree; Roland Henry; Hrishikesh Lokhande; Mariann Polgar-Turcsanyi; Mark Anderson; Rohit Bakshi; Howard L. Weiner; Tanuja Chitnis (npj Digit. Medicine, 2020)

Segmentation of Multiple Sclerosis Lesions across Hospitals: Learn Continually or Train from Scratch? - Enamundram Naga Karthik; Anne Kerbrat; Pierre Labauge; Tobias Granberg; Jason Talbott; Daniel S. Reich; Massimo Filippi; Rohit Bakshi; Virginie Callot; Sarath Chandar; Julien Cohen-Adad (CoRR, 2022)

PARE: A framework for removal of confounding effects from any distance-based dimension reduction method. - Andrew A. Chen; Kelly Clark; Blake E. Dewey; Anna Duval; Nicole Pellegrini; Govind Nair; Youmna Jalkh; Samar Khalil; Jon Zurawski; Peter A. Calabresi; Daniel S. Reich; Rohit Bakshi; et al. (PLoS Comput. Biol., 2024)