The Role of Compensatory Mutations in the Emergence of Drug Resistance. - Andreas Handel; Roland R. Regoes; Rustom Antia (PLoS Comput. Biol., 2006)

Correction: The Role of Compensatory Mutations in the Emergence of Drug Resistance. - Andreas Handel; Roland R. Regoes; Rustom Antia (PLoS Comput. Biol., 2007)

Investigating CTL Mediated Killing with a 3D Cellular Automaton. - Frederik Graw; Roland R. Regoes (PLoS Comput. Biol., 2009)

Similar Impact of CD8+ T Cell Responses on Early Virus Dynamics during SIV Infections of Rhesus Macaques and Sooty Mangabeys. - Roger D. Kouyos; Shari N. Gordon; Silvija I. Staprans; Guido Silvestri; Roland R. Regoes (PLoS Comput. Biol., 2010)

Estimating the Stoichiometry of HIV Neutralization. - Carsten Magnus; Roland R. Regoes (PLoS Comput. Biol., 2010)

Influence of the Fibroblastic Reticular Network on Cell-Cell Interactions in Lymphoid Organs. - Frederik Graw; Roland R. Regoes (PLoS Comput. Biol., 2012)

The Role of Exposure History on HIV Acquisition: Insights from Repeated Low-dose Challenge Studies. - Roland R. Regoes (PLoS Comput. Biol., 2012)

Estimating the In Vivo Killing Efficacy of Cytotoxic T Lymphocytes across Different Peptide-MHC Complex Densities. - Victor Garcia; Kirsten Richter; Frederik Graw; Annette Oxenius; Roland R. Regoes (PLoS Comput. Biol., 2015)

Investigating the Consequences of Interference between Multiple CD8+ T Cell Escape Mutations in Early HIV Infection. - Victor Garcia; Marcus W. Feldman; Roland R. Regoes (PLoS Comput. Biol., 2016)

Assessing the public health impact of tolerance-based therapies with mathematical models. - Nathanaël Hozé; Sebastian Bonhoeffer; Roland R. Regoes (PLoS Comput. Biol., 2018)

Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches. - Judith A. Bouman; Julien Riou; Sebastian Bonhoeffer; Roland R. Regoes (PLoS Comput. Biol., 2021)

Epidemiological and evolutionary consequences of different types of CRISPR-Cas systems. - Hélène Chabas; Viktor Müller; Sebastian Bonhoeffer; Roland R. Regoes (PLoS Comput. Biol., 2022)

Dose-dependent interaction of parasites with tiers of host defense predicts "wormholes" that prolong infection at intermediate inoculum sizes. - Andrea L. Graham; Roland R. Regoes (PLoS Comput. Biol., 2024)