Multidimensional Peptide/Protein Analysis and Identification by Sequence Database Search Using Mass Spectrometric Data. - Christian Schley; Matthias Altmeyer; Rolf Müller 002; Christian G. Huber (Computational Proteomics, 2005)

GeneTrail - advanced gene set enrichment analysis. - Christina Backes; Andreas Keller; Jan Küntzer; Benny Kneissl; Nicole Comtesse; Yasser A. Elnakady; Rolf Müller 002; Eckart Meese; Hans-Peter Lenhof (Nucleic Acids Res., 2007)

antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters. - Tilmann Weber; Kai Blin; Srikanth Duddela; Daniel Krug; Hyun Uk Kim; Robert E. Bruccoleri; Sang Yup Lee; Michael A. Fischbach; Rolf Müller 002; Wolfgang Wohlleben; Rainer Breitling; Eriko Takano; et al. (Nucleic Acids Res., 2015)

Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11, 087 Clinical Isolates. - Valentina Galata; Cedric Christian Laczny; Christina Backes; Georg Hemmrich-Stanisak; Susanne Schmolke; Andre Franke; Eckart Meese; Mathias Herrmann; Lutz von Müller; Achim Plum; Rolf Müller 002; Cord Stähler; et al. (Genom. Proteom. Bioinform., 2019)

miRMaster 2.0: multi-species non-coding RNA sequencing analyses at scale. - Tobias Fehlmann; Fabian Kern; Omar Laham; Christina Backes; Jeffrey Solomon; Pascal Hirsch; Carsten Volz; Rolf Müller 002; Andreas Keller (Nucleic Acids Res., 2021)

Systematic Cross-biospecimen Evaluation of DNA Extraction Kits for Long- and Short-read Multi-metagenomic Sequencing Studies. - Jacqueline Rehner; Georges Pierre Schmartz; Laura Groeger; Jan Dastbaz; Nicole Ludwig 001; Matthias Hannig; Stefan Rupf; Berthold Seitz; Elias Flockerzi; Tim Berger; Matthias Christian Reichert; Marcin Krawczyk; et al. (Genom. Proteom. Bioinform., 2022)

BusyBee Web: towards comprehensive and differential composition-based metagenomic binning. - Georges Pierre Schmartz; Pascal Hirsch; Jérémy Amand; Jan Dastbaz; Tobias Fehlmann; Fabian Kern; Rolf Müller 002; Andreas Keller (Nucleic Acids Res., 2022)

PLSDB: advancing a comprehensive database of bacterial plasmids. - Georges Pierre Schmartz; Anna Hartung; Pascal Hirsch; Fabian Kern; Tobias Fehlmann; Rolf Müller 002; Andreas Keller (Nucleic Acids Res., 2022)