[Invited Lecture] Protein Folds and Functions. - Janet M. Thornton; Andrew C. R. Martin; Christine A. Orengo; Duncan Milburn; Roman A. Laskowski (German Conference on Bioinformatics, 1998)

Dihydrofolate reductase: A potential drug target in trypanosomes and leishmania. - Fabio Zuccotto; Andrew C. R. Martin; Roman A. Laskowski; Janet M. Thornton; Ian H. Gilbert (J. Comput. Aided Mol. Des., 1998)

BLEEP - potential of mean force describing protein-ligand interactions: II. Calculation of binding energies and comparison with experimental data. - John B. O. Mitchell; Roman A. Laskowski; Alexander Alex; Mark J. Forster; Janet M. Thornton (J. Comput. Chem., 1999)

BLEEP - potential of mean force describing protein-ligand interactions: I. Generating potential. - John B. O. Mitchell; Roman A. Laskowski; Alexander Alex; Janet M. Thornton (J. Comput. Chem., 1999)

PDBsum: summaries and analyses of PDB structures. - Roman A. Laskowski (Nucleic Acids Res., 2001)

Amino acid?base interactions: a three-dimensional analysis of protein?DNA interactions at an atomic level. - Nicholas M. Luscombe; Roman A. Laskowski; Janet M. Thornton (Nucleic Acids Res., 2001)

Detecting cryptically simple protein sequences using the SIMPLE algorithm. - M. Mar Albà; Roman A. Laskowski; John M. Hancock (Bioinform., 2002)

PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids. - Roman A. Laskowski; Victor V. Chistyakov; Janet M. Thornton (Nucleic Acids Res., 2005)

ProFunc: a server for predicting protein function from 3D structure. - Roman A. Laskowski; James D. Watson; Janet M. Thornton (Nucleic Acids Res., 2005)

Enhancing the functional annotation of PDB structures in PDBsum using key figures extracted from the literature. - Roman A. Laskowski (Bioinform., 2007)

Variation of geometrical and physicochemical properties in protein binding pockets and their ligands. - Abdullah Kahraman; Richard J. Morris; Roman A. Laskowski; Janet M. Thornton (BMC Bioinform., 2007)

WSsas: a web service for the annotation of functional residues through structural homologues. - David Talavera; Roman A. Laskowski; Janet M. Thornton (Bioinform., 2009)

PDBsum new things. - Roman A. Laskowski (Nucleic Acids Res., 2009)

Predicting Protein Ligand Binding Sites by Combining Evolutionary Sequence Conservation and 3D Structure. - John A. Capra; Roman A. Laskowski; Janet M. Thornton; Mona Singh 001; Thomas A. Funkhouser (PLoS Comput. Biol., 2009)

ArchSchema: a tool for interactive graphing of related Pfam domain architectures. - Asif U. Tamuri; Roman A. Laskowski (Bioinform., 2010)

LigPlot+: Multiple Ligand-Protein Interaction Diagrams for Drug Discovery. - Roman A. Laskowski; Mark B. Swindells (J. Chem. Inf. Model., 2011)

FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies. - Nicholas Furnham; Ian Sillitoe; Gemma L. Holliday; Alison L. Cuff; Syed Asad Rahman; Roman A. Laskowski; Christine A. Orengo; Janet M. Thornton (Nucleic Acids Res., 2012)

Exploring the Evolution of Novel Enzyme Functions within Structurally Defined Protein Superfamilies. - Nicholas Furnham; Ian Sillitoe; Gemma L. Holliday; Alison L. Cuff; Roman A. Laskowski; Christine A. Orengo; Janet M. Thornton (PLoS Comput. Biol., 2012)

Amino Acid Changes in Disease-Associated Variants Differ Radically from Variants Observed in the 1000 Genomes Project Dataset. - Tjaart A. P. de Beer; Roman A. Laskowski; Sarah L. Parks; Botond Sipos; Nick Goldman; Janet M. Thornton (PLoS Comput. Biol., 2013)

Anatomy of enzyme channels. - Lukás Pravda; Karel Berka; Radka Svobodová Vareková; David Sehnal; Pavel Banás; Roman A. Laskowski; Jaroslav Koca; Michal Otyepka (BMC Bioinform., 2014)

PDBsum additions. - Tjaart A. P. de Beer; Karel Berka; Janet M. Thornton; Roman A. Laskowski (Nucleic Acids Res., 2014)

BetaCavityWeb: a webserver for molecular voids and channels. - Jae-Kwan Kim 001; Youngsong Cho; Mokwon Lee; Roman A. Laskowski; Seong Eon Ryu; Kokichi Sugihara; Deok-Soo Kim (Nucleic Acids Res., 2015)

CATH: comprehensive structural and functional annotations for genome sequences. - Ian Sillitoe; Tony E. Lewis; Alison L. Cuff; Sayoni Das; Paul Ashford; Natalie L. Dawson; Nicholas Furnham; Roman A. Laskowski; David A. Lee; Jonathan G. Lees; Sonja Lehtinen; Romain A. Studer; et al. (Nucleic Acids Res., 2015)

BetaSCPWeb: side-chain prediction for protein structures using Voronoi diagrams and geometry prioritization. - Joonghyun Ryu; Mokwon Lee; Jehyun Cha; Roman A. Laskowski; Seong Eon Ryu; Deok-Soo Kim (Nucleic Acids Res., 2016)

VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations. - James D. Stephenson; Roman A. Laskowski; Andrew Nightingale; Matthew E. Hurles; Janet M. Thornton (Bioinform., 2019)

An automated protocol for modelling peptide substrates to proteases. - Rodrigo Ochoa; Mikhail D. Magnitov; Roman A. Laskowski; Pilar Cossio; Janet M. Thornton (BMC Bioinform., 2020)

MGOS: A library for molecular geometry and its operating system. - Deok-Soo Kim; Joonghyun Ryu; Youngsong Cho; Mokwon Lee; Jehyun Cha; Chanyoung Song; Sangwha Kim; Roman A. Laskowski; Kokichi Sugihara; Jong Bhak; Seong Eon Ryu (Comput. Phys. Commun., 2020)