Optimal perturbation control of gene regulatory networks. - Nidhal Bouaynaya; Roman Shterenberg; Dan Schonfeld (GENSiPS, 2010)

Robustness of inverse perturbation for discrete event control. - Nidhal Bouaynaya; Roman Shterenberg; Dan Schonfeld (EMBC, 2011)

Clustering gene expression data using probabilistic non-negative matrix factorization. - Belhassen Bayar; Nidhal Bouaynaya; Roman Shterenberg (GENSiPS, 2011)

Intervention in general topology gene regulatory networks. - Nidhal Bouaynaya; Mohammed Rasheed; Roman Shterenberg; Dan Schonfeld (GENSiPS, 2011)

Inverse perturbation for optimal intervention in gene regulatory networks. - Nidhal Bouaynaya; Roman Shterenberg; Dan Schonfeld (Bioinform., 2011)

Methods for Optimal Intervention in Gene Regulatory Networks [Applications Corner]. - Nidhal Bouaynaya; Roman Shterenberg; Dan Schonfeld (IEEE Signal Process. Mag., 2012)

Inference of genetic regulatory networks with unknown covariance structure. - Belhassen Bayar; Nidhal Bouaynaya; Roman Shterenberg (GENSiPS, 2013)

Sparse biologically-constrained optimal perturbation of gene regulatory networks. - Haoyu Wang 006; Nidhal Bouaynaya; Roman Shterenberg; Dan Schonfeld (ICASSP, 2013)

Optimal Perturbation Control of General Topology Molecular Networks. - Nidhal Bouaynaya; Roman Shterenberg; Dan Schonfeld (IEEE Trans. Signal Process., 2013)

Kernel reconstruction: An exact greedy algorithm for compressive sensing. - Belhassen Bayar; Nidhal Bouaynaya; Roman Shterenberg (GlobalSIP, 2014)

Probabilistic Non-Negative Matrix Factorization: Theory and Application to microarray Data Analysis. - Belhassen Bayar; Nidhal Bouaynaya; Roman Shterenberg (J. Bioinform. Comput. Biol., 2014)

Constrained state estimation in particle filters. - Bradley Ebinger; Nidhal Bouaynaya; Robi Polikar; Roman Shterenberg (ICASSP, 2015)

EEG dynamic source localization using constrained particle filtering. - Nesrine Amor; Nidhal Bouaynaya; Petia Georgieva; Roman Shterenberg; Souad Chebbi (SSCI, 2016)

On the Convergence of Constrained Particle Filters. - Nesrine Amor; Nidhal Bouaynaya; Roman Shterenberg; Souad Chebbi (IEEE Signal Process. Lett., 2017)

SMURC: High-Dimension Small-Sample Multivariate Regression With Covariance Estimation. - Belhassen Bayar; Nidhal Bouaynaya; Roman Shterenberg (IEEE J. Biomed. Health Informatics, 2017)

AKRON: An algorithm for approximating sparse kernel reconstruction. - Gregory Ditzler; Nidhal Bouaynaya; Roman Shterenberg (Signal Process., 2018)

Constrained particle filtering for movement identification in forearm prosthesis. - Nesrine Amor; Ghulam Rasool 001; Nidhal C. Bouaynaya; Roman Shterenberg (Signal Process., 2019)

PremiUm-CNN: Propagating Uncertainty Towards Robust Convolutional Neural Networks. - Dimah Dera; Nidhal Carla Bouaynaya; Ghulam Rasool 001; Roman Shterenberg; Hassan M. Fathallah-Shaykh (IEEE Trans. Signal Process., 2021)

An Information Geometric Perspective to Adversarial Attacks and Defenses. - Kyle Naddeo; Nidhal Bouaynaya; Roman Shterenberg (IJCNN, 2022)

Measuring Heterogeneity in Machine Learning with Distributed Energy Distance. - Mengchen Fan; Baocheng Geng; Roman Shterenberg; Joseph A. Casey; Zhong Chen; Keren Li (CoRR, 2025)