DNAMAT: an efficient graphic matrix sequence homology algorithm and its application to structural analysis. - Ron Unger; David Harel; Joel L. Sussman (Comput. Appl. Biosci., 1986)

Genetic Algorithm for 3D Protein Folding Simulations. - Ron Unger; John Moult (ICGA, 1993)

The importance of short structural motifs in protein structure analysis. - Ron Unger; Joel L. Sussman (J. Comput. Aided Mol. Des., 1993)

Shuffling Biological Sequences. - Denise B. Kandel; Yossi Matias; Ron Unger; Peter Winkler 001 (Discret. Appl. Math., 1996)

Genetic Algorithms for Protein Threading. - Jacqueline Yadgari; Amihood Amir; Ron Unger (ISMB, 1998)

A simple algorithm for detecting circular permutations in proteins. - S. Uliel; A. Fliess; Amihood Amir; Ron Unger (Bioinform., 1999)

Genetic Threading. - Jacqueline Yadgari; Amihood Amir; Ron Unger (Constraints An Int. J., 2001)

PESI - An intelligent system for Prediction of Enzyme - Substrate Interactions based on experimental constraints. - German Nudelman; Tamar Tennenbaum; Ramit Mehr; Ron Unger (Silico Biol., 2002)

A rapid method for detection of putative RNAi target genes in genomic data. - Yair Horesh; Amihood Amir; Shulamit Michaeli; Ron Unger (ECCB, 2003)

The Made-In-Israel Bioinformatics Portal. - Yossi Rosenberg; Ron Unger (Briefings Bioinform., 2004)

A bottom-up clustering algorithm to detect ncRNA molecules with a common secondary structure. - Yair Horesh; Ron Unger (Int. J. Bioinform. Res. Appl., 2005)

Evolving High-Performance Evolutionary Computations for Space Vehicle Design. - Gerry V. Dozier; Winard Britt; Michael P. SanSoucie; Patrick V. Hull; Michael L. Tinker; Ron Unger; Steve Bancroft; Trevor Moeller; Dan Rooney (IEEE Congress on Evolutionary Computation, 2006)

Designing an A* Algorithm for Calculating Edit Distance between Rooted-Unordered Trees. - Yair Horesh; Ramit Mehr; Ron Unger (J. Comput. Biol., 2006)

Different mechanistic requirements for prokaryotic and eukaryotic chaperonins: a lattice study. - Etai Jacob; Amnon Horovitz; Ron Unger (ISMB/ECCB (Supplement of Bioinformatics), 2007)

A tale of two tails: why are terminal residues of proteins exposed? - Etai Jacob; Ron Unger (Bioinform., 2007)

Low folding propensity and high translation efficiency distinguish in vivo substrates of GroEL from other Escherichia coli proteins. - Orly Noivirt-Brik; Ron Unger; Amnon Horovitz (Bioinform., 2007)

RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules. - Yair Horesh; Tirza Doniger; Shulamit Michaeli; Ron Unger (BMC Bioinform., 2007)

Psiscan: a computational approach to identify H/ACA-like and AGA-like non-coding RNA in trypanosomatid genomes. - Inna Myslyuk; Tirza Doniger; Yair Horesh; Avraham Hury; Ran Hoffer; Yaara Ziporen; Shulamit Michaeli; Ron Unger (BMC Bioinform., 2008)

A conflict based SAW method for Constraint Satisfaction Problems. - Rafi Shalom; Mireille Avigal; Ron Unger (IEEE Congress on Evolutionary Computation, 2009)

RNAslider: a faster engine for consecutive windows folding and its application to the analysis of genomic folding asymmetry. - Yair Horesh; Ydo Wexler; Ilana Lebenthal; Michal Ziv-Ukelson; Ron Unger (BMC Bioinform., 2009)

Trade-off between Positive and Negative Design of Protein Stability: From Lattice Models to Real Proteins. - Orly Noivirt-Brik; Amnon Horovitz; Ron Unger (PLoS Comput. Biol., 2009)

Analysis of the effects of lifetime learning on population fitness using vose model. - Roi Yehoshua; Mireille Avigal; Ron Unger (GECCO, 2010)

Composition bias and the origin of ORFan genes. - Inbal Yomtovian; Nuttinee Teerakulkittipong; Byungkook Lee; John Moult; Ron Unger (Bioinform., 2010)

Hidden conformations in protein structures. - Haim Ashkenazy; Ron Unger; Yossef Kliger (Bioinform., 2011)

Building Today the Future Cadre of Informatics-oriented Physicians - Lessons from a New Biomedical Informatics Curriculum for Medical Doctors. - Ronen Tal-Botzer; Rachel S. Levy-Drummer; Gidi Rechavi; Ron Unger (BIOINFORMATICS, 2012)

Static network structure can be used to model the phenotypic effects of perturbations in regulatory networks. - Ariel Feiglin; Adar Hacohen; Avital Sarusi; Jasmin Fisher; Ron Unger; Yanay Ofran (Bioinform., 2012)

Non-local residue-residue contacts in proteins are more conserved than local ones. - Orly Noivirt-Brik; Gershon Hazan; Ron Unger; Yanay Ofran (Bioinform., 2013)

e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures. - Oz Solomon; Eran Eyal; Ninette Amariglio; Ron Unger; Gidi Rechavi (Bioinform., 2016)

DistilProtBert: a distilled protein language model used to distinguish between real proteins and their randomly shuffled counterparts. - Yaron Geffen; Yanay Ofran; Ron Unger (Bioinform., 2022)

Machine Learning in Electronic Health Records: Identifying High-Risk Obstetric Patients Pre and During Labor. - Michal Lipschuetz; Joshua Guedalia; Sarah M. Cohen; Ron Unger; Simcha Yagel; Yishai Sompolinsky (Nursing Informatics, 2024)