Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis. - Andrew E. Jaffe; Thomas Hyde; Joel Kleinman; Daniel Weinbergern; Joshua Chenoweth; Ronald McKay; Jeffrey T. Leek; Carlo Colantuoni (BMC Bioinform., 2015)

Erratum to: Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis. - Andrew E. Jaffe; Thomas Hyde; Joel Kleinman; Daniel R. Weinberger; Joshua Chenoweth; Ronald McKay; Jeffrey T. Leek; Carlo Colantuoni (BMC Bioinform., 2016)

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF. - Genevieve L. Stein-O'Brien; Jacob L. Carey; Waishing Lee; Michael Considine; Alexander V. Favorov; Emily Flam; Theresa Guo; Sijia Li; Luigi Marchionni; Thomas Sherman; Shawn Sivy; Daria A. Gaykalova; et al. (Bioinform., 2017)