FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context. - Malte Mader; Ronald Simon; Sascha Steinbiss; Stefan Kurtz (J. Clin. Bioinform., 2011)

FISH Oracle 2: a web server for integrative visualization of genomic data in cancer research. - Malte Mader; Ronald Simon; Stefan Kurtz (J. Clin. Bioinform., 2014)

Black-Box Hyperparameter Optimization for Nuclei Segmentation in Prostate Tissue Images. - Thomas Wollmann; Patrick Bernhard; Manuel Gunkel; Delia M. Braun; Jan Meiners; Ronald Simon; Guido Sauter; Holger Erfle; Karsten Rippe; Karl Rohr (Bildverarbeitung für die Medizin, 2019)

Hyperparameter optimization for image analysis: application to prostate tissue images and live cell data of virus-infected cells. - Christian Ritter; Thomas Wollmann; Patrick Bernhard; Manuel Gunkel; Delia M. Braun; Ji Young Lee; Jan Meiners; Ronald Simon; Guido Sauter; Holger Erfle; Karsten Rippe; Ralf Bartenschlager; et al. (Int. J. Comput. Assist. Radiol. Surg., 2019)