Babelomics 5.0: functional interpretation for new generations of genomic data. - Roberto Alonso; Francisco Salavert; Francisco García-García 002; José Carbonell-Caballero; Marta Bleda; Luz Garcia-Alonso; Alba Sanchis-Juan; Daniel Perez-Gil; Pablo Marín-García; Rubén Sánchez 002; Cankut Çubuk; Marta R. Hidalgo; et al. (Nucleic Acids Res., 2015)

Assessing the impact of mutations found in next generation sequencing data over human signaling pathways. - Rosa D. Hernansaiz-Ballesteros; Francisco Salavert; Patricia Sebastián-León; Alejandro Alemán; Ignacio Medina; Joaquín Dopazo (Nucleic Acids Res., 2015)

Efficient Switches in Biology and Computer Science. - Luca Cardelli; Rosa D. Hernansaiz-Ballesteros; Neil Dalchau; Attila Csikász-Nagy (PLoS Comput. Biol., 2017)

Single molecules can operate as primitive biological sensors, switches and oscillators. - Rosa D. Hernansaiz-Ballesteros; Luca Cardelli; Attila Csikász-Nagy (BMC Syst. Biol., 2018)

Computing with biological switches and clocks. - Neil Dalchau; Gregory Szép; Rosa D. Hernansaiz-Ballesteros; Chris P. Barnes; Luca Cardelli; Andrew Phillips; Attila Csikász-Nagy (Nat. Comput., 2018)

FUNKI: interactive functional footprint-based analysis of omics data. - Rosa D. Hernansaiz-Ballesteros; Christian H. Holland; Aurélien Dugourd; Julio Saez-Rodriguez (Bioinform., 2022)

MAVEN: compound mechanism of action analysis and visualisation using transcriptomics and compound structure data in R/Shiny. - Layla Hosseini-Gerami; Rosa D. Hernansaiz-Ballesteros; Anika Liu; Howard Broughton; David A. Collier; Andreas Bender (BMC Bioinform., 2023)