MGMR: leveraging RNA-Seq population data to optimize expression estimation. - Roye Rozov; Eran Halperin; Ron Shamir (BMC Bioinform., 2012)

Fast lossless compression via cascading Bloom filters. - Roye Rozov; Ron Shamir; Eran Halperin (BMC Bioinform., 2014)

Recycler: an algorithm for detecting plasmids from de novo assembly graphs. - Roye Rozov; Aya Brown Kav; David Bogumil; Naama Shterzer; Eran Halperin; Itzhak Mizrahi; Ron Shamir (Bioinform., 2017)

On reducing complexity of deep sequencing data analysis - Roye Rozov (2017)

Faucet: streaming de novo assembly graph construction. - Roye Rozov; Gil Goldshlager; Eran Halperin; Ron Shamir (Bioinform., 2018)