An improved kinetic model for the acetone-butanol-ethanol pathway of Clostridium acetobutylicum and model-based perturbation analysis. - Ru-Dong Li; Yuan-Yuan Li; Lingyi Lu; Cong Ren; Yi-Xue Li; Lei Liu (BMC Syst. Biol., 2011)

Characterizing criticality of proteins by systems dynamics: Escherichia coli central carbon metabolism as a working example. - Ru-Dong Li; Lei Liu (BMC Syst. Biol., 2012)

Identification of Hepatocellular Carcinoma-Related Genes with a Machine Learning and Network Analysis. - Tuantuan Gui; Xiao Dong; Ru-Dong Li; Yixue Li; Zhen Wang (J. Comput. Biol., 2015)

Digitalization of a non-irradiated acute myeloid leukemia model. - Ru-Dong Li; Hui Cheng; Tao Cheng; Lei Liu (BMC Syst. Biol., 2016)

System modeling reveals the molecular mechanisms of HSC cell cycle alteration mediated by Maff and Egr3 under leukemia. - Ru-Dong Li; Yin Wang; Hui Cheng; Gang Liu; Tao Cheng; Yunlong Liu; Lei Liu (BMC Syst. Biol., 2017)

Virtualisation of gene knockout experiments based on kinetic modelling: Escherichia coli as an algorithmic case. - Ru-Dong Li; Guohui Ding 001; Yixue Li (Int. J. Comput. Biol. Drug Des., 2017)