A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays. - Yuanyuan Xiao; Mark R. Segal; Yee Hwa Yang; Ru-Fang Yeh (Bioinform., 2007)

Analysis of High-throughput DNA Methylation Bead Arrays Utilizing Bayesian Genotyping Algorithms. - Yuanyuan Xiao; Mark R. Segal; Eugene Andres Houseman; Joseph Wiemels; John K. Wiencke; Shichun Zheng; Margaret R. Wrensch; Brock C. Christensen; Carmen J. Marsit; Karl T. Kelsey; Heather H. Nelson; Margaret R. Karagas; et al. (BMEI (1), 2008)

CompMoby: Comparative MobyDick for detection of cis-regulatory motifs. - Christina Chaivorapol; Collin Melton; Grace Wei; Ru-Fang Yeh; Miguel Ramalho-Santos; Robert Blelloch; Hao Li (BMC Bioinform., 2008)

Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions. - Eugene Andres Houseman; Brock C. Christensen; Ru-Fang Yeh; Carmen J. Marsit; Margaret R. Karagas; Margaret R. Wrensch; Heather H. Nelson; Joseph Wiemels; Shichun Zheng; John K. Wiencke; Karl T. Kelsey (BMC Bioinform., 2008)

SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system. - Alexander R. Pico; Ivan V. Smirnov; Jeffrey S. Chang; Ru-Fang Yeh; Joseph Wiemels; John K. Wiencke; Tarik Tihan; Bruce R. Conklin; Margaret R. Wrensch (Nucleic Acids Res., 2009)