Prediction of Transmembrane Proteins Based on the Continuous Wavelet Transform. - Jian-Ding Qiu; Ruping Liang; Xiaoyong Zou; Jinyuan Mo (J. Chem. Inf. Model., 2004)

Using support vector machines for prediction of protein structural classes based on discrete wavelet transform. - Jian-Ding Qiu; San-Hua Luo; Jian-Hua Huang; Ru-Ping Liang (J. Comput. Chem., 2009)

A novel algorithm combining support vector machine with the discrete wavelet transform for the prediction of protein subcellular localization. - Ru-Ping Liang; Shu-Yun Huang; Shao-Ping Shi 001; Xing-Yu Sun; Sheng-Bao Suo; Jian-Ding Qiu (Comput. Biol. Medicine, 2012)

Incorporating key position and amino acid residue features to identify general and species-specific Ubiquitin conjugation sites. - Xiang Chen; Jian-Ding Qiu; Shao-Ping Shi 001; Sheng-Bao Suo; Shu-Yun Huang; Ru-Ping Liang (Bioinform., 2013)

mUSP: a high-accuracy map of the in situ crosstalk of ubiquitylation and SUMOylation proteome predicted via the feature enhancement approach. - Hao-Dong Xu; Ru-Ping Liang; You-Gan Wang; Jian-Ding Qiu (Briefings Bioinform., 2021)