An Empirical Study for Impacts of Measurement Errors on EHR based Association Studies. - Rui Duan 004; Ming Cao 005; Yonghui Wu; Jing Huang 021; Joshua C. Denny; Hua Xu 001; Yong Chen 016 (AMIA, 2016)

Post-marketing Drug Safety Evaluation Using Data Mining Based on FAERS. - Rui Duan 004; Xinyuan Zhang 003; Jingcheng Du; Jing Huang 021; Cui Tao; Yong Chen 016 (DMBD, 2017)

Comparing the Human Papillomavirus Vaccination Opinions Trends from Different Twitter User Groups with a Machine Learning Based System and Semiparametric Nonlinear Regression. - Jingcheng Du; Jing Huang 021; Rui Duan 004; Yong Chen 016; Cui Tao (MedInfo, 2017)

Comparing Different Adverse Effects Among Multiple Drugs Using FAERS Data. - Jing Huang 021; Xinyuan Zhang 003; Jingcheng Du; Rui Duan 004; Liu Yang; Jason H. Moore; Yong Chen 016; Cui Tao (MedInfo, 2017)

Comparing adverse effects of Hepatitis C drugs using FAERS data. - Jing Huang 021; Xinyuan Zhang 003; Jiayi Tong; Jingcheng Du; Rui Duan 004; Liu Yang; Jason H. Moore; Yong Chen 016; Cui Tao (BIBM, 2018)

Comparing Pharmacovigilance Outcomes Between FAERS and EMR Data for Acute Mania Patients. - Xinyuan Zhang 003; Rui Duan 004; Jingcheng Du; Jing Huang 021; Yong Chen 016; Cui Tao (ICHI Workshops, 2018)

PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data. - Jing Huang 021; Rui Duan 004; Rebecca A. Hubbard; Yonghui Wu; Jason H. Moore; Hua Xu 001; Yong Chen 016 (J. Am. Medical Informatics Assoc., 2018)

Visualized Emotion Ontology: a model for representing visual cues of emotions. - Rebecca Lin; Muhammad Amith; Chen Liang 005; Rui Duan 004; Yong Chen 016; Cui Tao (BMC Medical Informatics Decis. Mak., 2018)

ODAL: A one-shot distributed algorithm to perform logistic regressions on electronic health records data from multiple clinical sites. - Rui Duan 004; Mary Regina Boland; Jason H. Moore; Yong Chen 016 (PSB, 2019)

Heterogeneity-aware and communication-efficient distributed statistical inference. - Rui Duan 004; Yang Ning; Yong Chen 016 (CoRR, 2019)

A regression framework to uncover pleiotropy in large-scale electronic health record data. - Ruowang Li; Rui Duan 004; Daniel J. Rader; Scott M. Damrauer; Jason H. Moore; Yong Chen 016 (J. Am. Medical Informatics Assoc., 2019)

Comparing drug safety of hepatitis C therapies using post-market data. - Jing Huang 021; Xinyuan Zhang 003; Jiayi Tong; Jingcheng Du; Rui Duan 004; Liu Yang; Jason H. Moore; Cui Tao; Yong Chen 016 (BMC Medical Informatics Decis. Mak., 2019)

Leverage Real-World Longitudinal Data in Large Clinical Research Networks for Alzheimer's Disease and Related Dementia (ADRD). - Rui Duan 004; Zhaoyi Chen; Jiayi Tong; Chongliang Luo; Tianchen Lyu; Cui Tao; Demetrius Maraganore; Jiang Bian 001; Yong Chen 016 (AMIA, 2020)

Identifying Clinical Risk Factors for Opioid Use Disorder using a Distributed Algorithm to Combine Real-World Data from a Large Clinical Data Research Network. - Jiayi Tong; Zhaoyi Chen; Rui Duan 004; Wei-Hsuan Lo-Ciganic; Tianchen Lyu; Cui Tao; Peter A. Merkel; Henry R. Kranzler; Jiang Bian 001; Yong Chen 016 (AMIA, 2020)

Evaluation of Phenotyping Errors on Polygenic Risk Score Predictions. - Ruowang Li; Jiayi Tong; Rui Duan 004; Yong Chen 016; Jason H. Moore (BIOINFORMATICS, 2020)

Robust-ODAL: Learning from Heterogeneous Health Systems Without Sharing Patient-LevelData. - Jiayi Tong; Rui Duan 004; Ruowang Li; Martijn J. Scheuemie; Jason H. Moore; Yong Chen 016 (PSB, 2020)

On the evidence consistency of pharmacovigilance outcomes between Food and Drug Administration Adverse Event Reporting System and electronic medical record data for acute mania patients. - Rui Duan 004; Xinyuan Zhang 003; Jingcheng Du; Jing Huang 021; Cui Tao; Yong Chen 016 (Health Informatics J., 2020)

Learning from electronic health records across multiple sites: A communication-efficient and privacy-preserving distributed algorithm. - Rui Duan 004; Mary Regina Boland; Zixuan Liu; Yue Liu; Howard H. Chang; Hua Xu 001; Haitao Chu; Christopher H. Schmid; Christopher B. Forrest; John H. Holmes; Martijn J. Schuemie; Jesse A. Berlin; et al. (J. Am. Medical Informatics Assoc., 2020)

Learning from local to global: An efficient distributed algorithm for modeling time-to-event data. - Rui Duan 004; Chongliang Luo; Martijn J. Schuemie; Jiayi Tong; C. Jason Liang; Howard H. Chang; Mary Regina Boland; Jiang Bian 001; Hua Xu 001; John H. Holmes; Christopher B. Forrest; Sally C. Morton; et al. (J. Am. Medical Informatics Assoc., 2020)

Targeting Underrepresented Populations in Precision Medicine: A Federated Transfer Learning Approach. - Sai Li; Tianxi Cai; Rui Duan 004 (CoRR, 2021)

SurvMaximin: Robust federated approach to transporting survival risk prediction models. - Xuan Wang; Harrison G. Zhang; Xin Xiong; Chuan Hong; Griffin M. Weber; Gabriel A. Brat; Clara-Lea Bonzel; Yuan Luo 001; Rui Duan 004; Nathan P. Palmer; Meghan R. Hutch; Alba Gutiérrez-Sacristán; et al. (J. Biomed. Informatics, 2022)

Distributed learning for heterogeneous clinical data with application to integrating COVID-19 data across 230 sites. - Jiayi Tong; Chongliang Luo; Md. Nazmul Islam; Natalie E. Sheils; John Buresh; Mackenzie J. Edmondson; Peter A. Merkel; Ebbing Lautenbach; Rui Duan 004; Yong Chen 016 (npj Digit. Medicine, 2022)

COMMUTE: Communication-efficient transfer learning for multi-site risk prediction. - Tian Gu; Phil H. Lee; Rui Duan 004 (J. Biomed. Informatics, 2023)

Federated One-Shot Ensemble Clustering. - Rui Duan 004; Xin Xiong; Jueyi Liu; Katherine P. Liao; Tianxi Cai (CoRR, 2024)

OrigamiPlot: An R Package and Shiny Web App Enhanced Visualizations for Multivariate Data. - Yiwen Lu; Jiayi Tong; Yuqing Lei; Alex J. Sutton; Haitao Chu; Lisa D. Levine; Thomas Lumley; David A. Asch; Rui Duan 004; Christopher H. Schmid; Yong Chen 016 (CoRR, 2024)

Confidence score: a data-driven measure for inclusive systematic reviews considering unpublished preprints. - Jiayi Tong; Chongliang Luo; Yifei Sun; Rui Duan 004; M. Elle Saine; Lifeng Lin; Yifan Peng 002; Yiwen Lu; Anchita Batra; Anni Pan; Olivia Wang; Ruowang Li; et al. (J. Am. Medical Informatics Assoc., 2024)