Optimizing analytical depth and cost efficiency of IEF-LC/MS proteomics. - Ilona Kifer; Amir Ben-Dor; Zohar Yakhini; Rui Mamede Branca; Janne Lehtiö; Ping Xu (BIBM, 2014)

Optimizing Analytical Depth and Cost Efficiency of IEF-LC/MS Proteomics. - Ilona Kifer; Rui Mamede Branca; Amir Ben-Dor; Linhui Zhai; Ping Xu; Janne Lehtiö; Zohar Yakhini (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Domain expertise-agnostic feature selection for the analysis of breast cancer data*. - Susanna Pozzoli; Amira Soliman 001; Leila Bahri; Rui Mamede Branca; Sarunas Girdzijauskas; Marco Brambilla 001 (Artif. Intell. Medicine, 2020)

Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides. - Husen M. Umer; Enrique Audain; Yafeng Zhu; Julianus Pfeuffer; Timo Sachsenberg; Janne Lehtiö; Rui Mamede Branca; Yasset Pérez-Riverol (Bioinform., 2022)