A spectrum graph-based protein sequence filtering algorithm for proteoform identification by top-down mass spectrometry. - Runmin Yang; Daming Zhu; Qiang Kou; Poornima Bhat-Nakshatri; Harikrishna Nakshatri; Si Wu; Xiaowen Liu (BIBM, 2017)

mzMD: A New Storage and Retrieval System for Mass Spectrometry Data. - Runmin Yang; Jingjing Ma; Shu Zhang 005; Yu Zheng; Lusheng Wang 001; Daming Zhu (ICIC (3), 2021)

mzMD: visualization-oriented MS data storage and retrieval. - Runmin Yang; Jingjing Ma; Shu Zhang 005; Yu Zheng; Lusheng Wang 001; Daming Zhu (Bioinform., 2022)

Algorithms and Hardness for Scaffold Filling to Maximize Increased Duo-Preservations. - Jingjing Ma; Haitao Jiang; Daming Zhu; Runmin Yang (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Data-based Stabilization of Unknown Discrete-time 2-D Roesser Systems. - Runmin Yang; Rongni Yang; Renjie Ma; Yanzheng Zhu; Peng Shi 001 (ICMLC, 2024)