Predicting deleterious non-synonymous single nucleotide polymorphisms in signal peptides based on hybrid sequence attributes. - Wenli Qin; Yizhou Li; Juan Li; Lezheng Yu; Di Wu; Runyu Jing; Xuemei Pu; Yanzhi Guo; Menglong Li (Comput. Biol. Chem., 2012)

PPM-Dom: A novel method for domain position prediction. - Jing Sun 007; Runyu Jing; Yuelong Wang; Tuanfei Zhu; Menglong Li; Yizhou Li (Comput. Biol. Chem., 2013)

The Effect of Edge Definition of Complex Networks on Protein Structure Identification. - Jing Sun 007; Runyu Jing; Di Wu; Tuanfei Zhu; Menglong Li; Yizhou Li (Comput. Math. Methods Medicine, 2013)

autoBioSeqpy: A Deep Learning Tool for the Classification of Biological Sequences. - Runyu Jing; Yizhou Li; Li Xue; Fengjuan Liu; Menglong Li; Jiesi Luo (J. Chem. Inf. Model., 2020)

A Multiple Comprehensive Analysis of scATAC-seq Based on Auto-Encoder and Matrix Decomposition. - Yuyao Huang; Yizhou Li; Yuan Liu; Runyu Jing; Menglong Li (Symmetry, 2021)

Multi-model predictive analysis of RNA solvent accessibility based on modified residual attention mechanism. - Yuyao Huang; Jiesi Luo; Runyu Jing; Menglong Li (Briefings Bioinform., 2022)

Sequence-based malware detection using a single-bidirectional graph embedding and multi-task learning framework. - Jiale Luo; Zhewngyu Zhang; Jiesi Luo; Pin Yang; Runyu Jing (J. Comput. Secur., 2024)

Unveiling diagnostic information for type 2 diabetes through interpretable machine learning. - Xiang Lv; Jiesi Luo; Yonglin Zhang; Hui Guo; Ming Yang; Menglong Li; Qi Chen; Runyu Jing (Inf. Sci., 2025)