Evaluation of Parameter Contribution to Neural Network Size and Fitness in ATHENA for Genetic Analysis. - Ruowang Li; Emily Rose Holzinger; Scott M. Dudek; Marylyn D. Ritchie (GPTP, 2013)

ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network. - Dokyoon Kim; Ruowang Li; Scott M. Dudek; Marylyn D. Ritchie (BioData Min., 2013)

An integrated analysis of genome-wide DNA methylation and genetic variants underlying etoposide-induced cytotoxicity in European and African populations. - Ruowang Li; Do Kyoon Kim; Scott M. Dudek; Marylyn D. Ritchie (EvoApplications, 2014)

Knowledge-driven genomic interactions: an application in ovarian cancer. - Do Kyoon Kim; Ruowang Li; Scott M. Dudek; Alex T. Frase; Sarah A. Pendergrass; Marylyn D. Ritchie (BioData Min., 2014)

Binning Somatic Mutations Based on Biological Knowledge for Predicting Survival: An Application in Renal Cell Carcinoma. - Dokyoon Kim; Ruowang Li; Scott M. Dudek; John R. Wallace; Marylyn D. Ritchie (Pacific Symposium on Biocomputing, 2015)

Predicting censored survival data based on the interactions between meta-dimensional omics data in breast cancer. - Dokyoon Kim; Ruowang Li; Scott M. Dudek; Marylyn D. Ritchie (J. Biomed. Informatics, 2015)

Biofilter as a Functional Annotation Pipeline for Common and Rare Copy Number Burden. - Dokyoon Kim; Anastasia Lucas; Joseph Glessner; Shefali S. Verma; Yukiko Bradford; Ruowang Li; Alex T. Frase; Hakon Hakonarson; Peggy L. Peissig; Murray H. Brilliant; Marylyn D. Ritchie (PSB, 2016)

Identification of genetic interaction networks via an evolutionary algorithm evolved Bayesian network. - Ruowang Li; Scott M. Dudek; Dokyoon Kim; Molly A. Hall; Yukiko Bradford; Peggy L. Peissig; Murray H. Brilliant; James G. Linneman; Catherine A. McCarty; Le Bao; Marylyn D. Ritchie (BioData Min., 2016)

Using knowledge-driven genomic interactions for multi-omics data analysis: metadimensional models for predicting clinical outcomes in ovarian carcinoma. - Dokyoon Kim; Ruowang Li; Anastasia Lucas; Shefali S. Verma; Scott M. Dudek; Marylyn D. Ritchie (J. Am. Medical Informatics Assoc., 2017)

Collective feature selection to identify crucial epistatic variants. - Shefali S. Verma; Anastasia Lucas; Xinyuan Zhang 003; Yogasudha Veturi; Scott M. Dudek; Binglan Li; Ruowang Li; Ryan J. Urbanowicz; Jason H. Moore; Dokyoon Kim; Marylyn D. Ritchie (BioData Min., 2018)

Integration of genetic and clinical information to improve imputation of data missing from electronic health records. - Ruowang Li; Yong Chen 016; Jason H. Moore (J. Am. Medical Informatics Assoc., 2019)

A regression framework to uncover pleiotropy in large-scale electronic health record data. - Ruowang Li; Rui Duan 004; Daniel J. Rader; Scott M. Damrauer; Jason H. Moore; Yong Chen 016 (J. Am. Medical Informatics Assoc., 2019)

Statistical Impact of Sample Size and Imbalance on Multivariate Analysis in silico and A Case Study in the UK Biobank. - Xinyuan Zhang 003; Ruowang Li; Marylyn D. Ritchie (AMIA, 2020)

Evaluation of Phenotyping Errors on Polygenic Risk Score Predictions. - Ruowang Li; Jiayi Tong; Rui Duan 004; Yong Chen 016; Jason H. Moore (BIOINFORMATICS, 2020)

Robust-ODAL: Learning from Heterogeneous Health Systems Without Sharing Patient-LevelData. - Jiayi Tong; Rui Duan 004; Ruowang Li; Martijn J. Scheuemie; Jason H. Moore; Yong Chen 016 (PSB, 2020)

Automated quantitative trait locus analysis (AutoQTL). - Philip J. Freda; Attri Ghosh; Elizabeth Zhang; Tianhao Luo; Apurva S. Chitre; Oksana Polesskaya; Celine L. St. Pierre; Jianjun Gao 004; Connor D. Martin; Hao Chen; Angel G. Garcia-Martinez; Tengfei Wang; et al. (BioData Min., 2023)

ChatGPT and large language models in academia: opportunities and challenges. - Jesse G. Meyer; Ryan J. Urbanowicz; Patrick C. N. Martin; Karen O'Connor; Ruowang Li; Pei-Chen Peng; Tiffani J. Bright; Nicholas P. Tatonetti; Kyoung-Jae Won; Graciela Gonzalez-Hernandez; Jason H. Moore (BioData Min., 2023)

Confidence score: a data-driven measure for inclusive systematic reviews considering unpublished preprints. - Jiayi Tong; Chongliang Luo; Yifei Sun; Rui Duan 004; M. Elle Saine; Lifeng Lin; Yifan Peng 002; Yiwen Lu; Anchita Batra; Anni Pan; Olivia Wang; Ruowang Li; et al. (J. Am. Medical Informatics Assoc., 2024)

Evaluating site-of-care-related racial disparities in kidney graft failure using a novel federated learning framework. - Jiayi Tong; Yishan Shen; Alice Xu; Xing He 003; Chongliang Luo; Mackenzie J. Edmondson; Dazheng Zhang; Yiwen Lu; Chao Yan 004; Ruowang Li; Lianne Siegel; Lichao Sun 001; et al. (J. Am. Medical Informatics Assoc., 2024)

Balancing the efforts of chart review and gains in PRS prediction accuracy: An empirical study. - Yuqing Lei; Adam Christian Naj; Hua Xu; Ruowang Li; Yong Chen (J. Biomed. Informatics, 2024)