Spatial clustering and common regulatory elements correlate with coordinated gene expression. - Jingyu Zhang; Hengyu Chen; Ruoyan Li; David A. Taft; Guang Yao; Fan Bai 009; Jianhua Xing (PLoS Comput. Biol., 2019)

Inverse Attention Agent for Multi-Agent System. - Qian Long; Ruoyan Li; Minglu Zhao; Tao Gao; Demetri Terzopoulos (CoRR, 2024)

Inverse Attention Agents for Multi-Agent Systems. - Qian Long; Ruoyan Li; Minglu Zhao; Tao Gao; Demetri Terzopoulos (ICLR, 2025)

Deep Generative Models with Hard Linear Equality Constraints. - Ruoyan Li; Dipti Ranjan Sahu; Guy Van den Broeck; Zhe Zeng (CoRR, 2025)

From Coarse to Fine: A Physics-Informed Self-Guided Flow Diffusion Model. - Ruoyan Li; Zijie Huang 002; Yizhou Sun; Wei Wang 010 (CoRR, 2025)

FD-Bench: A Modular and Fair Benchmark for Data-driven Fluid Simulation. - Haixin Wang 003; Ruoyan Li; Fred Xu; Fang Sun; Kaiqiao Han; Zijie Huang 002; Guancheng Wan; Ching Chang; Xiao Luo 001; Wei Wang 010; Yizhou Sun (CoRR, 2025)