Transcriptional Regulation by Competing Transcription Factor Modules. - Rutger Hermsen; Sander Tans; Pieter Rein ten Wolde (PLoS Comput. Biol., 2006)

Combinatorial Gene Regulation Using Auto-Regulation. - Rutger Hermsen; Bas Ursem; Pieter Rein ten Wolde (PLoS Comput. Biol., 2010)

Speed, Sensitivity, and Bistability in Auto-activating Signaling Circuits. - Rutger Hermsen; David W. Erickson; Terence Hwa (PLoS Comput. Biol., 2011)

Noise propagation in an integrated model of bacterial gene expression and growth. - Istvan T. Kleijn; Laurens H. J. Krah; Rutger Hermsen (PLoS Comput. Biol., 2018)

Toxin production spontaneously becomes regulated by local cell density in evolving bacterial populations. - Hilje M. Doekes; Rob J. De Boer; Rutger Hermsen (PLoS Comput. Biol., 2019)

The effect of natural selection on the propagation of protein expression noise to bacterial growth. - Laurens H. J. Krah; Rutger Hermsen (PLoS Comput. Biol., 2021)

Emergent multilevel selection in a simple spatial model of the evolution of altruism. - Rutger Hermsen (PLoS Comput. Biol., 2022)