A method for increasing expressivity of Gene Ontology annotations using a compositional approach. - Rachael P. Huntley; Midori A. Harris; Yasmin Alam-Faruque; Judith A. Blake; Seth Carbon; Heiko Dietze; Emily C. Dimmer; Rebecca E. Foulger; David P. Hill; Varsha K. Khodiyar; Antonia Lock; Jane Lomax; et al. (BMC Bioinform., 2014)

The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases. - Sandra E. Orchard; Mais G. Ammari; Bruno Aranda; Lionel Breuza; Leonardo Briganti; Fiona Broackes-Carter; Nancy H. Campbell; Gayatri Chavali; Carol Chen; Noemi del-Toro; Margaret J. Duesbury; Marine Dumousseau; et al. (Nucleic Acids Res., 2014)

Using Gene Ontology to describe the role of the neurexin-neuroligin-SHANK complex in human, mouse and rat and its relevance to autism. - Sejal Patel; Paola Roncaglia; Ruth C. Lovering (BMC Bioinform., 2015)

Using the Gene Ontology to Annotate Key Players in Parkinson's Disease. - Rebecca E. Foulger; Paul Denny 002; John Hardy; Maria Jesus Martin; Tony Sawford; Ruth C. Lovering (Neuroinformatics, 2016)

Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions. - M. Sivade Dumousseau; Diego Alonso-López; Mais G. Ammari; Glyn Bradley; Nancy H. Campbell; Arnaud Céol; Gianni Cesareni; Colin W. Combe; Javier De Las Rivas; Noemi del-Toro; Joshua Heimbach; Henning Hermjakob; et al. (BMC Bioinform., 2018)

Annotation of gene product function from high-throughput studies using the Gene Ontology. - Helen Attrill; Pascale Gaudet; Rachael P. Huntley; Ruth C. Lovering; Stacia R. Engel; Sylvain Poux; Kimberly M. Van Auken; George E. Georghiou; Marcus C. Chibucos; Tanya Z. Berardini; Valerie Wood; Harold J. Drabkin; et al. (Database J. Biol. Databases Curation, 2019)

CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination. - Livia Perfetto; Marcio Luis Acencio; Glyn Bradley; Gianni Cesareni; Noemi del-Toro; Dávid Fazekas; Henning Hermjakob; Tamás Korcsmáros; Martin Kuiper; Astrid Lægreid; Prisca Lo Surdo; Ruth C. Lovering; et al. (Bioinform., 2019)

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources. - Sebastian Köhler 001; Leigh Carmody; Nicole A. Vasilevsky; Julius O. B. Jacobsen; Daniel Danis; Jean-Philippe F. Gourdine; Michael A. Gargano; Nomi L. Harris; Nicolas Matentzoglu; Julie A. McMurry; David Osumi-Sutherland; Valentina Cipriani; et al. (Nucleic Acids Res., 2019)

Gene Ontology curation of the blood-brain barrier to improve the analysis of Alzheimer's and other neurological diseases. - Shirin C. C. Saverimuttu; Barbara Kramarz; Milagros Rodríguez-López; Penelope Garmiri; Helen Attrill; Katherine E. Thurlow; Marios Makris; Sandra M. Pinheiro; Sandra E. Orchard; Ruth C. Lovering (Database J. Biol. Databases Curation, 2021)

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). - Vasundra Touré; Steven Vercruysse; Marcio Luis Acencio; Ruth C. Lovering; Sandra E. Orchard; Glyn Bradley; Cristina Casals-Casas; Claudine Chaouiya; Noemi del-Toro; Åsmund Flobak; Pascale Gaudet; Henning Hermjakob; et al. (Bioinform., 2021)

The Gene Ontology resource: enriching a GOld mine. - Seth Carbon; Eric Douglass; Benjamin M. Good; Deepak R. Unni; Nomi L. Harris; Christopher J. Mungall; Siddartha Basu; Rex L. Chisholm; Robert J. Dodson; Eric Hartline; Petra Fey; Paul D. Thomas; et al. (Nucleic Acids Res., 2021)

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. - Blake A. Sweeney; Anton I. Petrov; Carlos Eduardo Ribas; Robert D. Finn; Alex Bateman; Maciej Szymanski; Wojciech M. Karlowski; Stefan E. Seemann; Jan Gorodkin; Jamie J. Cannone; Robin Ray Gutell; Simon Kay; et al. (Nucleic Acids Res., 2021)

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO). - Jolene Ramsey; Brenley K. McIntosh; Daniel P. Renfro; Suzanne A. Aleksander; Sandra A. LaBonte; Curtis Ross; Adrienne E. Zweifel; Nathan Liles; Shabnam Farrar; Jason J. Gill; Ivan Erill; Sarah Ades; et al. (PLoS Comput. Biol., 2021)

Tissue specific LRRK2 interactomes reveal a distinct striatal functional unit. - Yibo Zhao; Nikoleta Vavouraki; Ruth C. Lovering; Valentina Escott-Price; Kirsten Harvey; Patrick A. Lewis; Claudia Manzoni (PLoS Comput. Biol., 2023)

MicroRNA regulation of PPARG Signalling: Therapeutic implications for pulmonary hypertension. - Renzhi Su; Armalya Pritazahra; Shirin C. C. Saverimuttu; Ruth C. Lovering; Lucieh Clapp; Jigishaa Patel (Comput. Biol. Medicine, 2025)