Polyhedral combinatorics of UPGMA cones. - Ruth Davidson; Seth Sullivant (Adv. Appl. Math., 2013)

A lexicographic shellability characterization of geometric lattices. - Ruth Davidson; Patricia Hersh (J. Comb. Theory A, 2014)

Distance-Based Phylogenetic MethodsAround a Polytomy. - Ruth Davidson; Seth Sullivant (IEEE ACM Trans. Comput. Biol. Bioinform., 2014)

RGB image-based data analysis via discrete Morse theory and persistent homology. - Chuan Du; Christopher Szul; Adarsh Manawa; Nima Rasekh; Rosemary Guzman; Ruth Davidson (CoRR, 2018)

Efficient Quartet Representations of Trees and Applications to Supertree and Summary Methods. - Ruth Davidson; MaLyn Lawhorn; Joseph Rusinko; Noah Weber (IEEE ACM Trans. Comput. Biol. Bioinform., 2018)

Combinatorial and computational investigations of Neighbor-Joining bias. - Ruth Davidson; Abraham Martín del Campo (CoRR, 2020)