Cluster-based analysis of FMRI data. - Ruth Heller; Damian Stanley; Daniel Yekutieli; Nava Rubin; Yoav Benjamini (NeuroImage, 2006)

Conjunction group analysis: An alternative to mixed/random effect analysis. - Ruth Heller; Yulia Golland; Rafael Malach; Yoav Benjamini (NeuroImage, 2007)

A flexible two-stage procedure for identifying gene sets that are differentially expressed. - Ruth Heller; Elisabetta Manduchi; Gregory R. Grant; Warren J. Ewens (Bioinform., 2009)

Matching methods for observational microarray studies. - Ruth Heller; Elisabetta Manduchi; Dylan S. Small (Bioinform., 2009)

repfdr: a tool for replicability analysis for genome-wide association studies. - Ruth Heller; Shay Yaacoby; Daniel Yekutieli (Bioinform., 2014)

Is this the right normalization? A diagnostic tool for ChIP-seq normalization. - Claudia Angelini; Ruth Heller; Rita Volkinshtein; Daniel Yekutieli (BMC Bioinform., 2015)

Multivariate tests of association based on univariate tests. - Ruth Heller; Yair Heller (NIPS, 2016)

Consistent Distribution-Free $K$-Sample and Independence Tests for Univariate Random Variables. - Ruth Heller; Yair Heller; Shachar Kaufman; Barak Brill; Malka Gorfine (J. Mach. Learn. Res., 2016)

FWER and FDR control when testing multiple mediators. - Joshua N. Sampson; Simina M. Boca; Steven C. Moore; Ruth Heller (Bioinform., 2018)

Nonparametric Independence Tests and k-sample Tests for Large Sample Sizes Using Package HHG. - Barak Brill; Yair Heller; Ruth Heller (R J., 2018)

Comments on: Hierarchical inference for genome-wide association studies: a view on methodology with software. - Ruth Heller (Comput. Stat., 2020)

Statistical Testing for Efficient Out of Distribution Detection in Deep Neural Networks. - Matan Haroush; Tzviel Frostig; Ruth Heller; Daniel Soudry (CoRR, 2021)

A Statistical Framework for Efficient Out of Distribution Detection in Deep Neural Networks. - Matan Haroush; Tzviel Frostig; Ruth Heller; Daniel Soudry (ICLR, 2022)

Powerful batch conformal prediction for classification. - Ulysse Gazin; Ruth Heller; Étienne Roquain; Aldo Solari (AISTATS, 2025)