Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4. - Garrett M. Morris; David S. Goodsell; Ruth Huey; Arthur J. Olson (J. Comput. Aided Mol. Des., 1996)

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. - Garrett M. Morris; David S. Goodsell; Robert S. Halliday; Ruth Huey; William E. Hart; Richard K. Belew; Arthur J. Olson (J. Comput. Chem., 1998)

Integrating Biomolecular Analysis and Visual Programming: Flexibility and Interactivity in the Design of Bioinformatics Tools. - Daniel Stoffler; Sophie I. Coon; Ruth Huey; Arthur J. Olson; Michel F. Sanner (HICSS, 2003)

A semiempirical free energy force field with charge-based desolvation. - Ruth Huey; Garrett M. Morris; Arthur J. Olson; David S. Goodsell (J. Comput. Chem., 2007)

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility. - Garrett M. Morris; Ruth Huey; William Lindstrom; Michel F. Sanner; Richard K. Belew; David S. Goodsell; Arthur J. Olson (J. Comput. Chem., 2009)