Ruth E. Ley

According to our database, Ruth E. Ley authored at least 6 papers between 2013 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

ResMiCo: Increasing the quality of metagenome-assembled genomes with deep learning.

Olga Mineeva, Daniel Danciu, Bernhard Schölkopf, Ruth E. Ley, Gunnar Rätsch, Nicholas D. Youngblut

PLoS Comput. Biol., 2023

2022

Interpreting tree ensemble machine learning models with endoR.

Albane Ruaud, Niklas Pfister, Ruth E. Ley, Nicholas D. Youngblut

PLoS Comput. Biol., December, 2022

2020

DeepMAsED: evaluating the quality of metagenomic assemblies.

Olga Mineeva, Mateo Rojas-Carulla, Ruth E. Ley, Bernhard Schölkopf, Nicholas D. Youngblut

Bioinform., 2020

Struo: a pipeline for building custom databases for common metagenome profilers.

Jacobo de la Cuesta-Zuluaga, Ruth E. Ley, Nicholas D. Youngblut

Bioinform., 2020

2019

GeNet: Deep Representations for Metagenomics.

Mateo Rojas-Carulla, Ilya O. Tolstikhin, Guillermo Luque, Nicholas D. Youngblut, Ruth E. Ley, Bernhard Schölkopf

CoRR, 2019

2013

A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets.

Omry Koren, Dan Knight, Antonio González, Levi Waldron, Nicola Segata, Rob Knight, Curtis Huttenhower, Ruth E. Ley

PLoS Comput. Biol., 2013