Fragment-based identification of druggable 'hot spots' of proteins using Fourier domain correlation techniques. - Ryan Brenke; Dima Kozakov; Gwo-Yu Chuang; Dmitri Beglov; David R. Hall; Melissa R. Landon; Carla Mattos; Sandor Vajda (Bioinform., 2009)

Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase. - Melissa R. Landon; Raquel L. Lieberman; Quyen Q. Hoang; Shulin Ju; Jose M. M. Caaveiro; Susan D. Orwig; Dima Kozakov; Ryan Brenke; Gwo-Yu Chuang; Dmitri Beglov; Sandor Vajda; Gregory A. Petsko; et al. (J. Comput. Aided Mol. Des., 2009)

Application of asymmetric statistical potentials to antibody-protein docking. - Ryan Brenke; David R. Hall; Gwo-Yu Chuang; Stephen R. Comeau; Tanggis Bohnuud; Dmitri Beglov; Ora Schueler-Furman; Sandor Vajda; Dima Kozakov (Bioinform., 2012)