SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments. - David B. Burdick; Christopher C. Cavnor; Jeremy Handcock; Sarah A. Killcoyne; Jake Lin; Bruz Marzolf; Stephen A. Ramsey; Hector Rovira; Ryan Bressler; Ilya Shmulevich; John Boyle (BMC Bioinform., 2010)

Methods for visual mining of genomic and proteomic data atlases. - John Boyle; Richard Kreisberg; Ryan Bressler; Sarah A. Killcoyne (BMC Bioinform., 2012)

Fastbreak: a tool for analysis and visualization of structural variations in genomic data. - Ryan Bressler; Jake Lin; Andrea Eakin; Thomas Robinson; Richard Kreisberg; Hector Rovira; Theo A. Knijnenburg; John Boyle; Ilya Shmulevich (EURASIP J. Bioinform. Syst. Biol., 2012)