De novo transcriptome assembly with ABySS. - Inanç Birol; Shaun D. Jackman; Cydney B. Nielsen; Jenny Q. Qian; Richard Varhol; Greg Stazyk; Ryan D. Morin; Yongjun Zhao 002; Martin Hirst; Jacqueline E. Schein; Douglas E. Horsman; Joseph M. Connors; et al. (Bioinform., 2009)

SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors. - Rodrigo Goya; Mark G. F. Sun; Ryan D. Morin; Gillian Leung; Gavin Ha; Kimberley C. Wiegand; Janine Senz; Anamaria Crisan; Marco A. Marra; Martin Hirst; David G. Huntsman; Kevin P. Murphy; et al. (Bioinform., 2010)

Genomic analysis of a rare human tumor. - Steven J. M. Jones; Janessa Laskin; Yvonne Y. Li; Obi L. Griffith; Jianghong An; Mikhail Bilenky; Yaron S. N. Butterfield; Timothee Cezard; Eric Chuah; Richard Corbett; Anthony P. Fejes; Malachi Griffith; et al. (BMC Bioinform., 2010)

JointSNVMix: a probabilistic model for accurate detection of somatic mutations in normal/tumour paired next-generation sequencing data. - Andrew Roth; Jiarui Ding; Ryan D. Morin; Anamaria Crisan; Gavin Ha; Ryan Giuliany; Ali Bashashati; Martin Hirst; Gulisa Turashvili; Arusha Oloumi; Marco A. Marra; Sam Aparicio; et al. (Bioinform., 2012)

Collaborative intra-tumor heterogeneity detection. - Sahand Khakabimamaghani; Salem Malikic; Jeffrey Tang; Dujian Ding; Ryan D. Morin; Leonid Chindelevitch; Martin Ester (Bioinform., 2019)

SUBSTRA: Supervised Bayesian Patient Stratification. - Sahand Khakabimamaghani; Yogeshwar D. Kelkar; Bruno M. Grande; Ryan D. Morin; Martin Ester; Daniel Ziemek (Bioinform., 2019)