Carborane Clusters in Computational Drug Design: A Comparative Docking Evaluation Using AutoDock, FlexX, Glide, and Surflex. - Rohit Tiwari; Kiran Mahasenan; Ryan E. Pavlovicz; Chenglong Li; Werner Tjarks (J. Chem. Inf. Model., 2009)

Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3. - Stefan Schoebel; Wei Mi; Alexander Stein; Sergey Ovchinnikov 001; Ryan E. Pavlovicz; Frank DiMaio; David Baker 001; Melissa G. Chambers; Huayou Su; Dongsheng Li; Tom A. Rapoport; Maofu Liao (Nat., 2017)

Efficient consideration of coordinated water molecules improves computational protein-protein and protein-ligand docking discrimination. - Ryan E. Pavlovicz; Hahnbeom Park; Frank DiMaio (PLoS Comput. Biol., 2020)