Spatially-aware adaptive error correcting codes for flash memory. - Ryan Gabrys; Lara Dolecek (ACSCC, 2011)

Characterizing capacity achieving write once memory codes for multilevel flash memories. - Ryan Gabrys; Lara Dolecek (ISIT, 2011)

Non-binary WOM-codes for multilevel flash memories. - Ryan Gabrys; Eitan Yaakobi; Lara Dolecek; Paul H. Siegel; Alexander Vardy; Jack K. Wolf (ITW, 2011)

Coding for the binary asymmetric channel. - Ryan Gabrys; Lara Dolecek (ICNC, 2012)

Tackling intracell variability in TLC Flash through tensor product codes. - Ryan Gabrys; Eitan Yaakobi; Laura M. Grupp; Steven Swanson; Lara Dolecek (ISIT, 2012)

Dynamic Threshold Schemes for Multi-Level Non-Volatile Memories. - Frederic Sala; Ryan Gabrys; Lara Dolecek (IEEE Trans. Commun., 2013)

Graded Bit-Error-Correcting Codes With Applications to Flash Memory. - Ryan Gabrys; Eitan Yaakobi; Lara Dolecek (IEEE Trans. Inf. Theory, 2013)

Codes correcting erasures and deletions for rank modulation. - Ryan Gabrys; Eitan Yaakobi; Farzad Farnoud; Jehoshua Bruck (ISIT, 2014)

Single-deletion-correcting codes over permutations. - Ryan Gabrys; Eitan Yaakobi; Farzad Farnoud; Frederic Sala; Jehoshua Bruck; Lara Dolecek (ISIT, 2014)

Deletions in multipermutations. - Frederic Sala; Ryan Gabrys; Lara Dolecek (ISIT, 2014)

Gilbert-Varshamov-like lower bounds for deletion-correcting codes. - Frederic Sala; Ryan Gabrys; Lara Dolecek (ITW, 2014)

Coding for Unreliable Flash Memory Cells. - Ryan Gabrys; Frederic Sala; Lara Dolecek (IEEE Commun. Lett., 2014)

Channel Coding Strategies for Emerging Data Storage Systems. - Ryan Gabrys (2014)

Three novel combinatorial theorems for the insertion/deletion channel. - Frederic Sala; Ryan Gabrys; Clayton Schoeny; Lara Dolecek (ISIT, 2015)

Asymmetric Lee distance codes: New bounds and constructions. - Ryan Gabrys; Han Mao Kiah; Olgica Milenkovic (ITW, 2015)

Constructions of Nonbinary WOM Codes for Multilevel Flash Memories. - Ryan Gabrys; Lara Dolecek (IEEE Trans. Inf. Theory, 2015)

Correcting Grain-Errors in Magnetic Media. - Ryan Gabrys; Eitan Yaakobi; Lara Dolecek (IEEE Trans. Inf. Theory, 2015)

Balanced permutation codes. - Ryan Gabrys; Olgica Milenkovic (ISIT, 2016)

Codes in the damerau distance for DNA storage. - Ryan Gabrys; Eitan Yaakobi; Olgica Milenkovic (ISIT, 2016)

Exact sequence reconstruction for insertion-correcting codes. - Frederic Sala; Ryan Gabrys; Clayton Schoeny; Kayvon Mazooji; Lara Dolecek (ISIT, 2016)

Codes Correcting Erasures and Deletions for Rank Modulation. - Ryan Gabrys; Eitan Yaakobi; Farzad Farnoud; Frederic Sala; Jehoshua Bruck; Lara Dolecek (IEEE Trans. Inf. Theory, 2016)

Reconciling similar sets. - Ryan Gabrys; Farzad Farnoud Hassanzadeh (Allerton, 2017)

Set reconciliation with an inaccurate oracle. - Mark Bilinski; Ryan Gabrys (ICNC, 2017)

The hybrid k-deck problem: Reconstructing sequences from short and long traces. - Ryan Gabrys; Olgica Milenkovic (ISIT, 2017)

Asymmetric Lee Distance Codes for DNA-Based Storage. - Ryan Gabrys; Han Mao Kiah; Olgica Milenkovic (IEEE Trans. Inf. Theory, 2017)

Exact Reconstruction From Insertions in Synchronization Codes. - Frederic Sala; Ryan Gabrys; Clayton Schoeny; Lara Dolecek (IEEE Trans. Inf. Theory, 2017)

Codes Correcting a Burst of Deletions or Insertions. - Clayton Schoeny; Antonia Wachter-Zeh; Ryan Gabrys; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2017)

Optimal Placement of Honeypots for Network Defense. - Mark Bilinski; Ryan Gabrys; Justin Mauger (GameSec, 2018)

Unique Reconstruction of Coded Sequences from Multiset Substring Spectra. - Ryan Gabrys; Olgica Milenkovic (ISIT, 2018)

Reconstruction from Deletions in Racetrack Memories. - Yeow Meng Chee; Ryan Gabrys; Alexander Vardy; Van Khu Vu; Eitan Yaakobi (ITW, 2018)

Sequence Reconstruction Over the Deletion Channel. - Ryan Gabrys; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2018)

Codes in the Damerau Distance for Deletion and Adjacent Transposition Correction. - Ryan Gabrys; Eitan Yaakobi; Olgica Milenkovic (IEEE Trans. Inf. Theory, 2018)

Mutually Uncorrelated Primers for DNA-Based Data Storage. - S. M. Hossein Tabatabaei Yazdi; Han Mao Kiah; Ryan Gabrys; Olgica Milenkovic (IEEE Trans. Inf. Theory, 2018)

You only Lie Twice: A Multi-round Cyber Deception Game of Questionable Veracity. - Mark Bilinski; Kimberly Ferguson-Walter; Sunny Fugate; Ryan Gabrys; Justin Mauger; Brian Souza (GameSec, 2019)

A change would do you good: GA-Based approach for hiding data in program executables. - Ryan Gabrys; Luis Martinez (GECCO (Companion), 2019)

Reconstruction and Error-Correction Codes for Polymer-Based Data Storage. - Srilakshmi Pattabiraman; Ryan Gabrys; Olgica Milenkovic (ITW, 2019)

Optimal Codes Correcting a Single Indel / Edit for DNA-Based Data Storage. - Kui Cai 001; Yeow Meng Chee; Ryan Gabrys; Han Mao Kiah; Tuan Thanh Nguyen (CoRR, 2019)

Reconciling Similar Sets of Data. - Ryan Gabrys; Farzad Farnoud (IEEE Trans. Commun., 2019)

Unique Reconstruction of Coded Strings From Multiset Substring Spectra. - Ryan Gabrys; Olgica Milenkovic (IEEE Trans. Inf. Theory, 2019)

Codes Correcting Two Deletions. - Ryan Gabrys; Frederic Sala (IEEE Trans. Inf. Theory, 2019)

Constructions of Partial MDS Codes Over Small Fields. - Ryan Gabrys; Eitan Yaakobi; Mario Blaum; Paul H. Siegel (IEEE Trans. Inf. Theory, 2019)

Lie Another Day: Demonstrating Bias in a Multi-round Cyber Deception Game of Questionable Veracity. - Mark Bilinski; Joe DiVita; Kimberly Ferguson-Walter; Sunny Fugate; Ryan Gabrys; Justin Mauger; Brian Souza (GameSec, 2020)

How to swap instructions midstream: an embedding algorithm for program steganography. - Ryan Gabrys; Luis Martinez; Sunny Fugate (HotSoS, 2020)

Optimizing the Transition Waste in Coded Elastic Computing. - Hoang Dau; Ryan Gabrys; Yu-Chih Huang; Chen Feng 001; Quang-Hung Luu; Eidah J. Alzahrani; Zahir Tari (ISIT, 2020)

Locally Balanced Constraints. - Ryan Gabrys; Han Mao Kiah; Alexander Vardy; Eitan Yaakobi; Yiwei Zhang (ISIT, 2020)

Mass Error-Correction Codes for Polymer-Based Data Storage. - Ryan Gabrys; Srilakshmi Pattabiraman; Olgica Milenkovic (ISIT, 2020)

Optimal Codes for the q-ary Deletion Channel. - Jin Sima; Ryan Gabrys; Jehoshua Bruck (ISIT, 2020)

Syndrome Compression for Optimal Redundancy Codes. - Jin Sima; Ryan Gabrys; Jehoshua Bruck (ISIT, 2020)

Optimal Systematic t-Deletion Correcting Codes. - Jin Sima; Ryan Gabrys; Jehoshua Bruck (ISIT, 2020)

Segmented Reverse Concatenation: A New Approach to Constrained ECC. - Ryan Gabrys; Paul H. Siegel; Eitan Yaakobi (ISITA, 2020)

Reconstructing Mixtures of Coded Strings from Prefix and Suffix Compositions. - Ryan Gabrys; Srilakshmi Pattabiraman; Olgica Milenkovic (ITW, 2020)

Access balancing in storage systems by labeling partial Steiner systems. - Yeow Meng Chee; Charles J. Colbourn; Hoang Dau; Ryan Gabrys; Alan C. H. Ling; Dylan Lusi; Olgica Milenkovic (Des. Codes Cryptogr., 2020)

Set-Codes with Small Intersections and Small Discrepancies. - Ryan Gabrys; Son Hoang Dau; Charles J. Colbourn; Olgica Milenkovic (SIAM J. Discret. Math., 2020)

Coded Trace Reconstruction. - Mahdi Cheraghchi; Ryan Gabrys; Olgica Milenkovic; João Ribeiro 002 (IEEE Trans. Inf. Theory, 2020)

Bounds and Constructions of Codes Over Symbol-Pair Read Channels. - Ohad Elishco; Ryan Gabrys; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2020)

No Time to Lie: Bounds on the Learning Rate of a Defender for Inferring Attacker Target Preferences. - Mark Bilinski; Joseph DiVita; Kimberly Ferguson-Walter; Sunny Fugate; Ryan Gabrys; Justin Mauger; Brian Souza (GameSec, 2021)

Semiquantitative Group Testing in at Most Two Rounds. - Mahdi Cheraghchi; Ryan Gabrys; Olgica Milenkovic (ISIT, 2021)

Guest Editorial Special Issue: "From Deletion-Correction to Graph Reconstruction: In Memory of Vladimir I. Levenshtein". - Alexander Barg; Lara Dolecek; Ryan Gabrys; Gyula O. H. Katona; János Körner; Andrew McGregor 001; Olgica Milenkovic; Sihem Mesnager; Gilles Zémor (IEEE Trans. Inf. Theory, 2021)

Correcting a Single Indel/Edit for DNA-Based Data Storage: Linear-Time Encoders and Order-Optimality. - Kui Cai 001; Yeow Meng Chee; Ryan Gabrys; Han Mao Kiah; Tuan Thanh Nguyen (IEEE Trans. Inf. Theory, 2021)

Repeat-Free Codes. - Ohad Elishco; Ryan Gabrys; Eitan Yaakobi; Muriel Médard (IEEE Trans. Inf. Theory, 2021)

Permutation Codes for Correcting a Burst of at Most $t$ Deletions. - Shuche Wang; Yuanyuan Tang; Ryan Gabrys; Farzad Farnoud (Allerton, 2022)

Accelerating Polarization via Alphabet Extension. - Iwan M. Duursma; Ryan Gabrys; Venkatesan Guruswami; Ting-Chun Lin; Hsin-Po Wang 001 (APPROX/RANDOM, 2022)

Casino Rationale: Countering Attacker Deception in Zero-Sum Stackelberg Security Games of Bounded Rationality. - Ryan Gabrys; Mark Bilinski; Justin Mauger; Daniel Silva 012; Sunny Fugate (GameSec, 2022)

Recoverable systems on lines and grids. - Alexander Barg; Ohad Elishco; Ryan Gabrys; Eitan Yaakobi (ISIT, 2022)

The Gapped k-Deck Problem. - Rebecca Golm; Mina Nahvi; Ryan Gabrys; Olgica Milenkovic (ISIT, 2022)

Balanced and Swap-Robust Trades for Dynamical Distributed Storage. - Chao Pan 003; Ryan Gabrys; Xujun Liu; Charles J. Colbourn; Olgica Milenkovic (ISIT, 2022)

Correcting multiple short duplication and substitution errors. - Yuanyuan Tang; Shuche Wang; Ryan Gabrys; Farzad Farnoud (ISIT, 2022)

PCR, Tropical Arithmetic, and Group Testing. - Hsin-Po Wang 001; Ryan Gabrys; Alexander Vardy (ISIT, 2022)

The Credential is Not Enough: Deception with Honeypots and Fake Credentials. - Sonia Cromp; Mark Bilinski; Ryan Gabrys; Frederic Sala (GameSec, 2023)

Emotional State Classification and Related Behaviors Among Cyber Attackers. - Ryan Gabrys; Anu Venkatesh; Daniel Silva 012; Mark Bilinski; Maxine Major; Justin Mauger; Daniel H. Muhleman; Kimberly Ferguson-Walter (HICSS, 2023)

Finding a Burst of Positives via Nonadaptive Semiquantitative Group Testing. - Yun-Han Li; Ryan Gabrys; Jin Sima; Ilan Shomorony; Olgica Milenkovic (ISIT, 2023)

Quickly-Decodable Group Testing with Fewer Tests: Price-Scarlett's Nonadaptive Splitting with Explicit Scalars. - Hsin-Po Wang 001; Ryan Gabrys; Venkatesan Guruswami (ISIT, 2023)

Reconstruction of Sets of Strings From Prefix/Suffix Compositions. - Ryan Gabrys; Srilakshmi Pattabiraman; Olgica Milenkovic (IEEE Trans. Commun., 2023)

Beyond Single-Deletion Correcting Codes: Substitutions and Transpositions. - Ryan Gabrys; Venkatesan Guruswami; João Ribeiro 002; Ke Wu 001 (IEEE Trans. Inf. Theory, 2023)

Low-Redundancy Codes for Correcting Multiple Short-Duplication and Edit Errors. - Yuanyuan Tang; Shuche Wang; Hao Lou; Ryan Gabrys; Farzad Farnoud (IEEE Trans. Inf. Theory, 2023)

Transition Waste Optimization for Coded Elastic Computing. - Son Hoang Dau; Ryan Gabrys; Yu-Chih Huang; Chen Feng 001; Quang-Hung Luu; Eidah J. Alzahrani; Zahir Tari (IEEE Trans. Inf. Theory, 2023)

Sub-4.7 Scaling Exponent of Polar Codes. - Hsin-Po Wang 001; Ting-Chun Lin; Alexander Vardy; Ryan Gabrys (IEEE Trans. Inf. Theory, 2023)

Coding for Polymer-Based Data Storage. - Srilakshmi Pattabiraman; Ryan Gabrys; Olgica Milenkovic (IEEE Trans. Inf. Theory, 2023)

Tropical Group Testing. - Hsin-Po Wang 001; Ryan Gabrys; Alexander Vardy (IEEE Trans. Inf. Theory, 2023)

Using Natural Language Processing Tools to Infer Adversary Techniques and Tactics Under the Mitre ATT&CK Framework. - Ryan Gabrys; Mark Bilinski; Sunny Fugate; Daniel Silva 012 (CCWC, 2024)

Look Who's Talking Now: Covert Channels From Biased LLMs. - Daniel Silva 012; Frederic Sala; Ryan Gabrys (EMNLP (Findings), 2024)

Physiological Response to Cyber and Psychological Deception. - Nicholas Wymbs; Maxine Major; Ryan Gabrys; Kimberly Ferguson-Walter (HICSS, 2024)

Covering All Bases: The Next Inning in DNA Sequencing Efficiency. - Hadas Abraham; Ryan Gabrys; Eitan Yaakobi (ISIT, 2024)

Error-Correcting Codes for Combinatorial Composite DNA. - Omer Sabary; Inbal Preuss; Ryan Gabrys; Zohar Yakhini; Leon Anavy; Eitan Yaakobi (ISIT, 2024)

Asymptotically Optimal Codes Correcting One Substring Edit. - L. Yuting; Yuanyuan Tang; Hao Lou; Ryan Gabrys; Farzad Farnoud (ISIT, 2024)

Error-Correcting Codes for Combinatorial DNA Composite. - Omer Sabary; Inbal Preuss; Ryan Gabrys; Zohar Yakhini; Leon Anavy; Eitan Yaakobi (CoRR, 2024)

Quickly-Decodable Group Testing with Fewer Tests: Price-Scarlett and Cheraghchi-Nakos's Nonadaptive Splitting with Explicit Scalars. - Hsin-Po Wang 001; Ryan Gabrys; Venkatesan Guruswami (CoRR, 2024)

HoneyGAN Pots: A Deep Learning Approach for Generating Honeypots. - Ryan Gabrys; Daniel Silva 012; Mark Bilinski (CoRR, 2024)

Non-Binary Codes for Correcting a Burst of at Most t Deletions. - Shuche Wang; Yuanyuan Tang; Jin Sima; Ryan Gabrys; Farzad Farnoud (IEEE Trans. Inf. Theory, 2024)

Storage codes and recoverable systems on lines and grids. - Alexander Barg; Ohad Elishco; Ryan Gabrys; Geyang Wang; Eitan Yaakobi (Des. Codes Cryptogr., 2024)

Tail-Erasure-Correcting Codes. - Boaz Moav; Ryan Gabrys; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2024)

Exploring the Efficacy of Multi-Agent Reinforcement Learning for Autonomous Cyber Defence: A CAGE Challenge 4 Perspective. - Mitchell Kiely; Metin Ahiskali; Etienne Borde; Benjamin Bowman; David Bowman; Dirk Van Bruggen; KC Cowan; Prithviraj Dasgupta; Erich Devendorf; Ben Edwards; Alex Fitts; Sunny Fugate; et al. (AAAI, 2025)

Making it to First: The Random Access Problem in DNA Storage. - Avital Boruchovsky; Ohad Elishco; Ryan Gabrys; Anina Gruica; Itzhak Tamo; Eitan Yaakobi (CoRR, 2025)

Correcting a Substring Edit Error of Bounded Length. - Yuanyuan Tang; Sarvin Motamen; Hao Lou; Kallie Whritenour; Shuche Wang; Ryan Gabrys; Farzad Farnoud (IEEE Trans. Commun., 2025)

Cover Your Bases: How to Minimize the Sequencing Coverage in DNA Storage Systems. - Daniella Bar-Lev; Omer Sabary; Ryan Gabrys; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2025)

Robust Gray Codes Approaching the Optimal Rate. - Roni Con; Dorsa Fathollahi; Ryan Gabrys; Mary Wootters; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2025)

One Code Fits All: Strong Stuck-At Codes for Versatile Memory Encoding. - Roni Con; Ryan Gabrys; Eitan Yaakobi (IEEE Trans. Inf. Theory, 2025)

Linear List Decodable Edit-Correcting Codes with Rate Approaching 1. - Yuting Li; Ryan Gabrys; Farzad Farnoud (CoRR, 2025)

Asymptotically Optimal Codes Correcting One Substring Edit. - Yuting Li; Yuanyuan Tang; Hao Lou; Ryan Gabrys; Farzad Farnoud (CoRR, 2025)

The Labeled Coupon Collector Problem. - Andrew Tan; Oriel Limor; Daniella Bar-Lev; Ryan Gabrys; Zohar Yakhini; Paul H. Siegel (CoRR, 2025)

Optimal Codes Correcting a Substring Edit. - Yuting Li; Yuanyuan Tang; Hao Lou; Ryan Gabrys; Farzad Farnoud Hassanzadeh (IEEE Trans. Inf. Theory, 2025)

More on codes for combinatorial composite DNA. - Zuo Ye; Omer Sabary; Ryan Gabrys; Eitan Yaakobi; Ohad Elishco (Des. Codes Cryptogr., 2025)