Deblurring Subject to Nonnegativity Constraints when Known Functions are Present, with Application to Object-Constrained Computerized Tomography. - Donald L. Snyder; Joseph A. O'Sullivan; Bruce R. Whiting; Ryan J. Murphy; Jasenka Benac; J. Adam Cataldo; Jeffrey F. Williamson (IEEE Trans. Medical Imaging, 2001)

Prospects for quantitative CT imaging in the presence of foreign metal bodies using statistical image reconstruction. - Jeffrey F. Williamson; Bruce R. Whiting; Jasenka Benac; Ryan J. Murphy; G. James Blaine; Joseph A. O'Sullivan; David G. Politte; Donald L. Snyder (ISBI, 2002)

Incorporating known information into image reconstruction algorithms for transmission tomography. - Ryan J. Murphy; Joseph A. O'Sullivan; Jasenka Benac; Donald L. Snyder; Bruce R. Whiting; David G. Politte; Jeffrey F. Williamson (Image Processing, 2002)

Sieve-regularized image reconstruction algorithm with pose search in transmission tomography. - Ryan J. Murphy; Donald L. Snyder; David G. Politte; Joseph A. O'Sullivan (Image Processing, 2003)

Pose estimation of known objects during transmission tomographic image reconstruction. - Ryan J. Murphy; Shenyu Yan; Joseph A. O'Sullivan; Donald L. Snyder; Bruce R. Whiting; David G. Politte; Giovanni Lasio; Jeffrey F. Williamson (IEEE Trans. Medical Imaging, 2006)

Statistical atlas based extrapolation of CT data. - Gouthami Chintalapani; Ryan J. Murphy; Robert S. Armiger; Jyri Lepistö; Yoshito Otake; Nobuhiko Sugano; Russell H. Taylor; Mehran Armand (Image-Guided Procedures, 2010)

Cable length estimation for a compliant surgical manipulator. - Sean M. Segreti; Michael Dennis Mays Kutzer; Ryan J. Murphy; Mehran Armand (ICRA, 2012)

Constrained workspace generation for snake-like manipulators with applications to minimally invasive surgery. - Ryan J. Murphy; Matthew Moses; Michael Dennis Mays Kutzer; Gregory S. Chirikjian; Mehran Armand (ICRA, 2013)

Model-based cone-beam CT reconstruction for image-guided minimally invasive treatment of hip osteolysis. - Yoshito Otake; J. Webster Stayman; Wojciech Zbijewski; Ryan J. Murphy; Michael D. M. Kutzer; Russell H. Taylor; Jeffrey H. Siewerdsen; Mehran Armand (Image-Guided Procedures, 2013)

Control of the coupled motion of a 6 DoF robotic arm and a continuum manipulator for the treatment of pelvis osteolysis. - Farshid Alambeigi; Ryan J. Murphy; Ehsan Basafa; Russell H. Taylor; Mehran Armand (EMBC, 2014)

Effects of tools inserted through snake-like surgical manipulators. - Ryan J. Murphy; Yoshito Otake; Kevin C. Wolfe; Russell H. Taylor; Mehran Armand (EMBC, 2014)

Approaches to robotic teleoperation in a disaster scenario: From supervised autonomy to direct control. - Kapil D. Katyal; Christopher Y. Brown; Steven A. Hechtman; Matthew P. Para; Timothy G. McGee; Kevin C. Wolfe; Ryan J. Murphy; Michael D. M. Kutzer; Edward W. Tunstel; Michael P. McLoughlin; Matthew S. Johannes (IROS, 2014)

Predicting kinematic configuration from string length for a snake-like manipulator not exhibiting constant curvature bending. - Ryan J. Murphy; Yoshito Otake; Russell H. Taylor; Mehran Armand (IROS, 2014)

Piecewise-rigid 2D-3D registration for pose estimation of snake-like manipulator using an intraoperative x-ray projection. - Yoshito Otake; Ryan J. Murphy; Michael D. M. Kutzer; Russell Highsmith Taylor; Mehran Armand (Image-Guided Procedures, 2014)

Design and kinematic characterization of a surgical manipulator with a focus on treating osteolysis. - Ryan J. Murphy; Michael Dennis Mays Kutzer; Sean M. Segreti; Blake C. Lucas; Mehran Armand (Robotica, 2014)

Estimating the configuration of a continuum dexterous manipulator with variable curvature bending using partial shape-sensing. - Ryan J. Murphy; Mehran Armand (EMBC, 2015)

Computer-assisted single-stage cranioplasty. - Ryan J. Murphy; Kevin C. Wolfe; Peter C. Liacouras; Gerald T. Grant; Chad R. Gordon; Mehran Armand (EMBC, 2015)

Smooth extrapolation of unknown anatomy via statistical shape models. - Robert B. Grupp; Hsin-Hong Chiang; Yoshito Otake; Ryan J. Murphy; Chad R. Gordon; Mehran Armand; Russell H. Taylor (Image-Guided Procedures, 2015)

Comparison of optimization strategy and similarity metric in atlas-to-subject registration using statistical deformation model. - Yoshito Otake; Ryan J. Murphy; Robert B. Grupp; Yoshinobu Sato; Russell H. Taylor; Mehran Armand (Image-Guided Procedures, 2015)

Development of a biomechanical guidance system for periacetabular osteotomy. - Ryan J. Murphy; Robert S. Armiger; Jyri Lepistö; Simon C. Mears; Russell H. Taylor; Mehran Armand (Int. J. Comput. Assist. Radiol. Surg., 2015)

Computer-assisted, Le Fort-based, face-jaw-teeth transplantation: a pilot study on system feasiblity and translational assessment. - Ryan J. Murphy; Chad R. Gordon; Ehsan Basafa; Peter Liacouras; Gerald T. Grant; Mehran Armand (Int. J. Comput. Assist. Radiol. Surg., 2015)

Towards real-time shape sensing of continuum manipulators utilizing fiber Bragg grating sensors. - Amirhossein Farvardin; Ryan J. Murphy; Robert B. Grupp; Iulian Iordachita; Mehran Armand (BioRob, 2016)

Toward robot-assisted hard osteolytic lesion treatment using a continuum manipulator. - Farshid Alambeigi; Yu Wang 083; Ryan J. Murphy; Iulian Iordachita; Mehran Armand (EMBC, 2016)

Evaluating the deflection of dexterous continuum manipulators with unevenly distributed compliant joints. - Anzhu Gao; Ryan J. Murphy; Hao Liu 008; Iulian Iordachita; Mehran Armand (EMBC, 2016)

Design and characterization of a debriding tool in robot-assisted treatment of osteolysis. - Farshid Alambeigi; Shahriar Sefati; Ryan J. Murphy; Iulian Iordachita; Mehran Armand (ICRA, 2016)

Progress toward robotic surgery of the lateral skull base: Integration of a dexterous continuum manipulator and flexible ring curette. - Anzhu Gao; John P. Carey; Ryan J. Murphy; Iulian Iordachita; Russell H. Taylor; Mehran Armand (ICRA, 2016)

FBG-based large deflection shape sensing of a continuum manipulator: Manufacturing optimization. - Shahriar Sefati; Farshid Alambeigi; Iulian Iordachita; Ryan J. Murphy; Mehran Armand (IEEE SENSORS, 2016)

Nested marsupial robotic system for search and sampling in increasingly constrained environments. - Joseph L. Moore; Kevin C. Wolfe; Matthew S. Johannes; Kapil D. Katyal; Matthew P. Para; Ryan J. Murphy; Jessica M. Hatch; Colin J. Taylor; Robert J. Bamberger; Edward W. Tunstel (SMC, 2016)

A Curved-Drilling Approach in Core Decompression of the Femoral Head Osteonecrosis Using a Continuum Manipulator. - Farshid Alambeigi; Yu Wang 083; Shahriar Sefati; Cong Gao 003; Ryan J. Murphy; Iulian Iordachita; Russell H. Taylor; Harpal Khanuja; Mehran Armand (IEEE Robotics Autom. Lett., 2017)

Development and Experimental Evaluation of Concurrent Control of a Robotic Arm and Continuum Manipulator for Osteolytic Lesion Treatment. - Paul Wilkening; Farshid Alambeigi; Ryan J. Murphy; Russell H. Taylor; Mehran Armand (IEEE Robotics Autom. Lett., 2017)

FBG-Based Control of a Continuum Manipulator Interacting with Obstacles. - Shahriar Sefati; Ryan J. Murphy; Farshid Alambeigi; Michael Pozin; Iulian Iordachita; Russell H. Taylor; Mehran Armand (IROS, 2018)

Reliability of computer-assisted periacetabular osteotomy using a minimally invasive approach. - Sepp de Raedt; Inger Mechlenburg; Maiken Stilling; Lone Rømer; Ryan J. Murphy; Mehran Armand; Jyri Lepistö; Marleen de Bruijne; Kjeld Søballe (Int. J. Comput. Assist. Radiol. Surg., 2018)

Pelvis Surface Estimation From Partial CT for Computer-Aided Pelvic Osteotomies. - Robert B. Grupp; Yoshito Otake; Ryan J. Murphy; Javad Parvizi; Mehran Armand; Russell H. Taylor (CoRR, 2019)

Fast and Automatic Periacetabular Osteotomy Fragment Pose Estimation Using Intraoperatively Implanted Fiducials and Single-View Fluoroscopy. - Robert B. Grupp; Ryan J. Murphy; Rachel Hegeman; Clayton P. Alexander; Mathias Unberath; Yoshito Otake; Benjamin A. McArthur; Mehran Armand; Russell H. Taylor (CoRR, 2019)

Automatic annotation of hip anatomy in fluoroscopy for robust and efficient 2D/3D registration. - Robert B. Grupp; Mathias Unberath; Cong Gao 003; Rachel A. Hegeman; Ryan J. Murphy; Clayton P. Alexander; Yoshito Otake; Benjamin A. McArthur; Mehran Armand; Russell H. Taylor (Int. J. Comput. Assist. Radiol. Surg., 2020)

Pose Estimation of Periacetabular Osteotomy Fragments With Intraoperative X-Ray Navigation. - Robert B. Grupp; Rachel A. Hegeman; Ryan J. Murphy; Clayton P. Alexander; Yoshito Otake; Benjamin A. McArthur; Mehran Armand; Russell H. Taylor (IEEE Trans. Biomed. Eng., 2020)

Travelling waves in a free boundary mechanobiological model of an epithelial tissue. - Ryan J. Murphy; Pascal R. Buenzli; Ruth E. Baker; Matthew J. Simpson (Appl. Math. Lett., 2021)

Growth and adaptation mechanisms of tumour spheroids with time-dependent oxygen availability. - Ryan J. Murphy; Gency Gunasingh; Nikolas K. Haass; Matthew J. Simpson (PLoS Comput. Biol., 2023)