Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes. - Dennis K. Gascoigne; Seth W. Cheetham; Pierre B. Cattenoz; Michael B. Clark; Paulo P. Amaral; Ryan J. Taft; Dagmar Wilhelm; Marcel E. Dinger; John S. Mattick (Bioinform., 2012)

Information compression exploits patterns of genome composition to discriminate populations and highlight regions of evolutionary interest. - Nicholas J. Hudson 001; Laercio R. Porto-Neto; James Kijas; Sean McWilliam; Ryan J. Taft; Antonio Reverter (BMC Bioinform., 2014)

ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions. - Egor Dolzhenko; Viraj Deshpande; Felix Schlesinger; Peter Krusche; Roman Petrovski; Sai Chen; Dorothea Emig-Agius; Andrew Gross; Giuseppe Narzisi; Brett Bowman; Konrad Scheffler; Joke J. F. A van Vugt; et al. (Bioinform., 2019)