A Pareto-optimal compositional energy-based model for sampling and optimization of protein sequences. - Natasa Tagasovska; Nathan C. Frey; Andreas Loukas; Isidro Hötzel; Julien Lafrance-Vanasse; Ryan Lewis Kelly; Yan Wu 027; Arvind Rajpal; Richard Bonneau; Kyunghyun Cho; Stephen Ra; Vladimir Gligorijevic (CoRR, 2022)

Blind Biological Sequence Denoising with Self-Supervised Set Learning. - Nathan H. Ng; Ji Won Park; Jae Hyeon Lee; Ryan Lewis Kelly; Stephen Ra; Kyunghyun Cho (Trans. Mach. Learn. Res., 2024)