R3D Align: global pairwise alignment of RNA 3D structures using local superpositions. - Ryan R. Rahrig; Neocles Leontis; Craig L. Zirbel (Bioinform., 2010)

R3D Align web server for global nucleotide to nucleotide alignments of RNA 3D structures. - Ryan R. Rahrig; Anton I. Petrov; Neocles Leontis; Craig L. Zirbel (Nucleic Acids Res., 2013)