Statistical relationships among docking scores for different protein binding sites. - Ryan T. Koehler; Hugo O. Villar (J. Comput. Aided Mol. Des., 2000)

Design of screening libraries biased for pharmaceutical discovery. - Ryan T. Koehler; Hugo O. Villar (J. Comput. Chem., 2000)

Distributions of Free Energy, Melting Temperature, and Hybridization Propensity for Genomic DNA Oligomers. - Ryan T. Koehler; Nicolas Peyret (CSB, 2002)

Thermodynamic properties of DNA sequences: characteristic values for the human genome. - Ryan T. Koehler; Nicolas Peyret (Bioinform., 2005)

Effects of DNA secondary structure on oligonucleotide probe binding efficiency. - Ryan T. Koehler; Nicolas Peyret (Comput. Biol. Chem., 2005)