De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads. - David Hernández; Ryan Tewhey; Jean-Baptiste Veyrieras; Laurent Farinelli; Magne Østerås; Patrice François; Jacques Schrenzel (Bioinform., 2014)

CoRE-ATAC: A deep learning model for the functional classification of regulatory elements from single cell and bulk ATAC-seq data. - Asa Thibodeau; Shubham Khetan; Alper Eroglu; Ryan Tewhey; Michael L. Stitzel; Duygu Ucar (PLoS Comput. Biol., 2021)