Enhancing immune response to HIV infection using MPC-based treatment scheduling. - Ryan Zurakowski; Andrew R. Teel (ACC, 2003)

Utilizing alternate target cells in treating HIV infection through scheduled treatment. - Ryan Zurakowski; Andrew R. Teel; Dominik Wodarz (ACC, 2004)

An output-feedback MPC-based scheduling method for enhancing immune response to HIV. - Ryan Zurakowski (ACC, 2006)

Modeling and control for in vitro combination therapy using ONYX-015 replicating adenovirus. - Ryan Zurakowski; Dominik Wodarz (ACC, 2006)

Treatment interruptions to decrease risk of resistance emerging during therapy switching in HIV treatment. - Ryan Zurakowski; Dominik Wodarz (CDC, 2007)

A new strategy to decrease risk of resistance emerging during therapy switching in HIV treatment. - Rutao Luo; Ryan Zurakowski (ACC, 2008)

A generalized multi-strain model of HIV evolution with implications for drug-resistance management. - Rutao Luo; Michael J. Piovoso; Ryan Zurakowski (ACC, 2009)

Modeling-error robustness of a viral-load preconditioning strategy for HIV treatment switching. - Rutao Luo; Michael J. Piovoso; Ryan Zurakowski (ACC, 2010)

Closed-loop minimal sampling method for determining viral-load minima during switching. - Esteban Emelio Rosero-Garcia; Ryan Zurakowski (ACC, 2010)

Approximate-model closed-loop minimal sampling method for HIV viral-load minima detection. - Ryan Zurakowski; Matthew Churgin; Camilo Perez; Matthew Rodriguez (ACC, 2011)

Measurement error robustness of a closed-loop minimal sampling method for HIV therapy switching. - E. Fabian Cardozo; Ryan Zurakowski (EMBC, 2011)

Quantitative analysis of viral persistence and transient viral load rebound from HIV clinical data. - Rutao Luo; Michael J. Piovoso; Ryan Zurakowski (EMBC, 2011)

Resistance evolution in HIV - Modeling when to intervene. - Liliana Mabel Peinado Cortes; Ryan Zurakowski (ACC, 2012)

A compartment based model for the formation of 2-LTR circles after raltegravir intensification. - E. Fabian Cardozo; Cesar Augusto Vargas Garcia; Ryan Zurakowski (CDC, 2012)

Kalman filter-based tracking of multiple similar objects from a moving camera platform. - Cory Miller; Bethany Allik; Mark Ilg; Ryan Zurakowski (CDC, 2012)

Robust Closed-Loop Minimal Sampling Method for HIV Therapy Switching Strategies. - E. Fabian Cardozo; Ryan Zurakowski (IEEE Trans. Biomed. Eng., 2012)

Conditions for invasion of synapse-forming HIV variants. - Cesar Augusto Vargas Garcia; Ryan Zurakowski; Abhyudai Singh (CDC, 2013)

Ballistic Roll Estimation using EKF Frequency Tracking and Adaptive Noise Cancellation. - Bethany Allik; Mark Ilg; Ryan Zurakowski (IEEE Trans. Aerosp. Electron. Syst., 2013)

Estimation of saturated data using the Tobit Kalman filter. - Bethany Allik; Cory Miller; Michael J. Piovoso; Ryan Zurakowski (ACC, 2014)

Analysis of HIV-1 compartmental model parameters using Bayesian MCMC estimation. - Erwing Fabian Cardozo; Ryan Zurakowski; Nii O. Attoh-Okine (ACC, 2014)

Evaluation of HIV 2-LTR formation models using monotone system theory. - Michael J. Piovoso; Ryan Zurakowski (ACC, 2014)

Estimation of mobile vehicle range & position using the tobit Kalman filter. - Cory Miller; Bethany Allik; Michael J. Piovoso; Ryan Zurakowski (CDC, 2014)

Nonlinear estimators for censored data: A comparison of the EKF, the UKF and the Tobit Kalman filter. - Bethany Allik; Cory Miller; Michael J. Piovoso; Ryan Zurakowski (ACC, 2015)

Recursive estimation with quantized and censored measurements. - Bethany Allik; Michael J. Piovoso; Ryan Zurakowski (ACC, 2016)

Prospective HIV clinical trial comparison by expected Kullback-Leibler Divergence. - Lamont Cannon; Cesar Augusto Vargas Garcia; Michael J. Piovoso; Ryan Zurakowski (ACC, 2016)

Order preservation of expected information content using Unscented Transform approximation of multivariate prior distributions in HIV 2-LTR experiment design. - George Abraham; Aditya Jagarapu; Lamont Cannon; Ryan Zurakowski (CDC, 2016)

The Tobit Kalman Filter: An Estimator for Censored Measurements. - Bethany Allik; Cory Miller; Michael J. Piovoso; Ryan Zurakowski (IEEE Trans. Control. Syst. Technol., 2016)

Experiment design for early molecular events in HIV infection. - Aditya Jagarapu; LaMont Cannon; Ryan Zurakowski (ACC, 2017)

The effect of multiplicity of infection on the temperateness of a bacteriophage: Implications for viral fitness. - Joshua A. Blotnick; Cesar Augusto Vargas Garcia; John J. Dennehy; Ryan Zurakowski; Abhyudai Singh (CDC, 2017)

Implications of measurement assay type in design of HIV experiments. - LaMont Cannon; Aditya Jagarapu; Cesar Augusto Vargas Garcia; Michael J. Piovoso; Ryan Zurakowski (CDC, 2017)

Positive Feedback Through Inflammation Creates Bistable Behavior in HIV Tissue Sanctuaries. - Aditya Jagarapu; Rajveer Mann; Michael J. Piovoso; Ryan Zurakowski (ACC, 2019)

Optimal control modulation of HIV reservoir formation rate by antigen infusion. - Aditya Jagarapu; Michael J. Piovoso; Ryan Zurakowski (CDC, 2019)