A Vectorization Technique for a Family of Finite Difference Formulae and Its Performance Evaluation. - Seiji Fujino; Ryutaro Himeno (PARA, 1996)

High Reynolds Number Computation for Turbulent Heat Transfer in a Pipe Flow. - Shin-ichi Satake; Tomoaki Kunugi; Ryutaro Himeno (ISHPC, 2000)

A MRI Based Semi-Automatic Modeling System for Computational Biomechanics Simulation. - Tomoaki Hayasaka; Hao Liu 016; Ryutaro Himeno; Takami Yamaguchi (MIAR, 2001)

Visualization of Thermal Flows in an Automotive Cabin with Volume Rendering Method. - Kenji Ono; Hideki Matsumoto; Ryutaro Himeno (VisSym, 2001)

A parallel 3D unsteady incompressible flow solver on VPP700. - B. V. Rathish Kumar; Takami Yamaguchi; Hao Liu 016; Ryutaro Himeno (Parallel Comput., 2001)

Constructing a Virtual Laboratory on the Internet: The ITBL Portal. - Yoshinari Fukui; Andrew Stubbings; Takashi Yamazaki; Ryutaro Himeno (ISHPC, 2003)

Evaluation of High-Speed VPN Using CFD Benchmark. - Nobuhiko Tsuruoka; Motoyoshi Kurokawa; Ryutaro Himeno (ISHPC, 2003)

Performance of Network Intrusion Detection Cluser System. - Katsuhiro Watanabe; Nobuhiko Tsuruoka; Ryutaro Himeno (ISHPC, 2003)

The niching method for obtaining global optima and local optima in multimodal functions. - Masako Himeno; Ryutaro Himeno (Syst. Comput. Jpn., 2003)

Semi-automated color segmentation from a biological cross-sectional image series: follicle segmentation from the equine ovary. - Satoko Takemoto; Taketoshi Mishima; Ryutaro Himeno; Junpei Kimura; Shigehisa Tsumagari; Hideo Yokota; Sakiko Nakamura; Yasuo Nambo (SMC (4), 2004)

Development of User-friendly Supercomputing Portal in Bio Research Field. - Hiroaki Yuasa; Takeshi Iwasaki; Motoyoshi Kurokawa; Takayuki Shigetani; Tsuyoshi Horiki; Ryutaro Himeno (e-Science, 2005)

The RIKEN Super Combined Cluster as a Grid-Enabled System. - Ryutaro Himeno; Motoyoshi Kurokawa; Hiroaki Yuasa; Takayuki Shigetani (it Inf. Technol., 2005)

Peta-Scale Supercomputer Project in Japan and Challenges to Life and Human Simulation in Japan. - Ryutaro Himeno (PVM/MPI, 2006)

Gordon Bell finalists II - A 55 TFLOPS simulation of amyloid-forming peptides from yeast prion Sup35 with the special-purpose computer system MDGRAPE-3. - Tetsu Narumi; Yousuke Ohno; Noriaki Okimoto; Takahiro Koishi; Atsushi Suenaga; Noriyuki Futatsugi; Ryoko Yanai; Ryutaro Himeno; Shigenori Fujikawa; Makoto Taiji; Mitsuru Ikei (SC, 2006)

A numerical coupling model to analyze the blood flow, temperature, and oxygen transport in human breast tumor under laser irradiation. - Ying He; Minoru Shirazaki; Hao Liu 016; Ryutaro Himeno; Zhigang Sun (Comput. Biol. Medicine, 2006)

A 281 Tflops calculation for X-ray protein structure analysis with special-purpose computers MDGRAPE-3. - Yousuke Ohno; Eiji Nishibori; Tetsu Narumi; Takahiro Koishi; Tahir H. Tahirov; Hideo Ago; Masashi Miyano; Ryutaro Himeno; Toshikazu Ebisuzaki; Makoto Sakata; Makoto Taiji (SC, 2007)

DLM: A distributed Large Memory System using remote memory swapping over cluster nodes. - Hiroko Midorikawa; Motoyoshi Kurokawa; Ryutaro Himeno; Mitsuhisa Sato (CLUSTER, 2008)

Simulations of Needle Insertion by Using a Eulerian Hydrocode FEM and the Experimental Validations. - Hiroyuki Kataoka; Shigeho Noda; Hideo Yokota; Shu Takagi; Ryutaro Himeno; Shigenobu Okazawa (MICCAI (2), 2008)

Finite element analysis of blood flow and heat transfer in an image-based human finger. - Ying He; Hao Liu 016; Ryutaro Himeno; Junko Sunaga; Nobunori Kakusho; Hideo Yokota (Comput. Biol. Medicine, 2008)

Trial Formation of Artificial Bone by Inkjet Powder-Layered Manufacturing. - Kenji Yamazawa; Masahiro Anzai; Hideo Yokota; Ryutaro Himeno; Hiroshi Suzuki; Hiroyuki Narahara; Shigeki Suzuki (Int. J. Autom. Technol., 2008)

Decision algorithm for 3D blood vessel loop based on a route edit distance. - D. Kobayashi; H. Yokota; S. Morishita; K. Hiraoka; K. Fukasaku; Ryutaro Himeno; T. Mishima (Image Processing, 2009)

Application of MDGRAPE-3, a special purpose board for molecular dynamics simulations, to periodic biomolecular systems. - Gota Kikugawa; Rossen Apostolov; Narutoshi Kamiya; Makoto Taiji; Ryutaro Himeno; Haruki Nakamura; Yasushige Yonezawa (J. Comput. Chem., 2009)

Multi-scale modeling of the human cardiovascular system with applications to aortic valvular and arterial stenoses. - Fuyou Liang; Shu Takagi; Ryutaro Himeno; Hao Liu 016 (Medical Biol. Eng. Comput., 2009)

A parallel programming framework orchestrating multiple languages and architectures. - Masana Murase; Hideaki Komatsu; Kumiko Maeda; Shigeho Noda; Munehiro Doi; Ryutaro Himeno (Conf. Computing Frontiers, 2011)

A Fast Implementation of Matrix-matrix Product in Double-double Precision on NVIDIA C2050 and Application to Semidefinite Programming. - Maho Nakata; Yasuyoshi Takao; Shigeho Noda; Ryutaro Himeno (ICNC, 2012)

Automatic Resource Scheduling with Latency Hiding for Parallel Stencil Applications on GPGPU Clusters. - Kumiko Maeda; Masana Murase; Munehiro Doi; Hideaki Komatsu; Shigeho Noda; Ryutaro Himeno (IPDPS, 2012)

Grand Challenge in Life Science on K Computer. - Ryutaro Himeno (VECPAR, 2012)

Biomedical Image Communication Platform. - Masahiko Morita; Takehiro Tawara; Masaomi Nishimura; Shin Yoshizawa 001; Bukai Chou; Ippei Kuroki; Takashi Ijiri; Yuki Tsujimura; Ryutaro Himeno; Hideo Yokota (CANDAR, 2013)

Communication Platform for Image Analysis and Sharing in Biology. - Masahiko Morita; Takehiro Tawara; Masaomi Nishimura; Shin Yoshizawa 001; Bukai Chou; Ippei Kuroki; Takashi Ijiri; Yuki Tsujimura; Ryutaro Himeno; Hideo Yokota (Int. J. Netw. Comput., 2014)

Binding Free-Energy Calculation Is a Powerful Tool for Drug Optimization: Calculation and Measurement of Binding Free Energy for 7-Azaindole Derivatives to Glycogen Synthase Kinase-3β. - Kunihiro Kitamura; Yunoshin Tamura; Tomokazu Ueki; Koji Ogata; Shigeho Noda; Ryutaro Himeno; Hiroshi Chuman (J. Chem. Inf. Model., 2014)

Three-Dimensional Observation of Microstructure of Bone Tissue Using High-Precision Machining. - Naomichi Furushiro; Hideo Yokota; Sakiko Nakamura; Kazuhiro Fujisaki; Yutaka Yamagata; Mitsunori Kokubo; Ryutaro Himeno; Akitake Makinouchi; Toshiro Higuchi (Int. J. Autom. Technol., 2017)

Automatic spin measurements for pitched Baseballs via consumer-grade high-speed cameras. - Takashi Ijiri; Atsushi Nakamura; Akira Hirabayashi; Wataru Sakai; Takeshi Miyazaki; Ryutaro Himeno (Signal Image Video Process., 2017)

Resolution Enhancement of UWB Time-Reversal Microwave Imaging in Dispersive Environments. - Loukas Xanthos; Mehmet Emre Yavuz; Ryutaro Himeno; Hideo Yokota; Fumie Costen (IEEE Trans. Computational Imaging, 2021)

Enhancing Large Scale Brain Simulation with Optimized Parallel Algorithms on Fugaku Supercomputer. - Tianxiang Lyu; Mitsuhisa Sato; Shigeki Aoki; Ryutaro Himeno; Zhe Sun (CLUSTER Workshops, 2024)

Optimizing graph neural network architectures for schizophrenia spectrum disorder prediction using evolutionary algorithms. - Shurun Wang; Hao Tang; Ryutaro Himeno; Jordi Solé-Casals; Cesar F. Caiafa; Shuning Han; Shigeki Aoki; Zhe Sun (Comput. Methods Programs Biomed., 2024)

CORTEX: Large-Scale Brain Simulator Utilizing Indegree Sub-Graph Decomposition on Fugaku Supercomputer. - Tianxiang Lyu; Mitsuhisa Sato; Shigeki Aoki; Ryutaro Himeno; Zhe Sun (CoRR, 2024)

Revolutionizing MRI Data Processing Using FSL: Preliminary Findings with the Fugaku Supercomputer. - Tianxiang Lyu; Wataru Uchida; Zhe Sun; Christina Andica; Keita Tokuda; Rui Zou; Jie Mao; Keigo Shimoji; Koji Kamagata; Mitsuhisa Sato; Ryutaro Himeno; Shigeki Aoki (CoRR, 2024)