Dynamic regulatory on/off minimization for biological systems under internal temporal perturbations. - Sabrina Kleessen; Zoran Nikoloski (BMC Syst. Biol., 2012)

The Sequence Reconstruction Problem. - Angela Angeleska; Sabrina Kleessen; Zoran Nikoloski (Discrete and Topological Models in Molecular Biology, 2014)

iReMet-flux: constraint-based approach for integrating relative metabolite levels into a stoichiometric metabolic models. - Max Sajitz-Hermstein; Nadine Töpfer; Sabrina Kleessen; Alisdair R. Fernie; Zoran Nikoloski (Bioinform., 2016)