Towards Generic Pattern Mining. - Mohammed Javeed Zaki; Nilanjana De; Feng Gao 016; Nagender Parimi; Benjarath Phoophakdee; Joe Urban; Vineet Chaoji; Mohammad Al Hasan; Saeed Salem (PReMI, 2005)

ORIGAMI: Mining Representative Orthogonal Graph Patterns. - Mohammad Al Hasan; Vineet Chaoji; Saeed Salem; Jérémy Besson; Mohammed Javeed Zaki (ICDM, 2007)

SPARCL: Efficient and Effective Shape-Based Clustering. - Vineet Chaoji; Mohammad Al Hasan; Saeed Salem; Mohammed J. Zaki (ICDM, 2008)

An integrated, generic approach to pattern mining: data mining template library. - Vineet Chaoji; Mohammad Al Hasan; Saeed Salem; Mohammed Javeed Zaki (Data Min. Knowl. Discov., 2008)

ORIGAMI: A Novel and Effective Approach for Mining Representative Orthogonal Graph Patterns. - Vineet Chaoji; Mohammad Al Hasan; Saeed Salem; Jérémy Besson; Mohammed J. Zaki (Stat. Anal. Data Min., 2008)

Clustering with Lower Bound on Similarity. - Mohammad Al Hasan; Saeed Salem; Benjarath Pupacdi; Mohammed J. Zaki (PAKDD, 2009)

Iterative Non-Sequential protein Structural Alignment. - Saeed Salem; Mohammed J. Zaki; Christopher Bystroff (J. Bioinform. Comput. Biol., 2009)

SPARCL: an effective and efficient algorithm for mining arbitrary shape-based clusters. - Vineet Chaoji; Mohammad Al Hasan; Saeed Salem; Mohammed J. Zaki (Knowl. Inf. Syst., 2009)

Robust partitional clustering by outlier and density insensitive seeding. - Mohammad Al Hasan; Vineet Chaoji; Saeed Salem; Mohammed J. Zaki (Pattern Recognit. Lett., 2009)

Non-sequential and flexible protein structure alignment. - Saeed Salem (2009)

A formal study of classification techniques on entity discovery and their application to opinion mining. - Shadi Banitaan; Saeed Salem; Wei Jin 006; Ibrahim Aljarah (SMUC@CIKM, 2010)

Sequential Data Clustering. - Jianfei Wu; Loai Al Nimer; Omar Al Azzam; Charith Chitraranjan; Saeed Salem; Anne M. Denton (ICMLA, 2010)

FlexSnap: Flexible Non-sequential Protein Structure Alignment. - Saeed Salem; Mohammed J. Zaki; Chris Bystroff (Algorithms Mol. Biol., 2010)

CLARM: an integrative approach for functional modules discovery. - Saeed Salem; Loqmane Seridi; Rami Alroobi; James E. Brewer; Shadi Banitaan; Ibrahim Aljarah (BCB, 2011)

Frequent Substring-Based Sequence Classification with an Ensemble of Support Vector Machines Trained Using Reduced Amino Acid Alphabets. - Charith Chitraranjan; Loai Al Nimer; Omar Al Azzam; Saeed Salem; Anne M. Denton; Muhammad J. Iqbal; Shahryar F. Kianian (ICMLA (2), 2011)

Discovering Communities in Social Networks Using Topology and Attributes. - Saeed Salem; Shadi Banitaan; Ibrahim Aljarah; James E. Brewer; Rami Alroobi (ICMLA (1), 2011)

Selecting discriminating terms for bug assignment: a formal analysis. - Ibrahim Aljarah; Shadi Banitaan; Sameer Abufardeh; Wei Jin 006; Saeed Salem (PROMISE, 2011)

SimClus: an effective algorithm for clustering with a lower bound on similarity. - Mohammad Al Hasan; Saeed Salem; Mohammed J. Zaki (Knowl. Inf. Syst., 2011)

Discovering maximal cohesive subgraphs and patterns from attributed biological networks. - Saeed Salem; Rami Alroobi; Syed Ahmed; Mohammad Hossain (BIBM Workshops, 2012)

MFMS: maximal frequent module set mining from multiple human gene expression data sets. - Saeed Salem; Cagri Ozcaglar (BIOKDD, 2013)

No-boundary thinking in bioinformatics research. - Xiuzhen Huang; Barry Bruce; Alison Buchan; Clare Bates Congdon; Carole L. Cramer; Steven F. Jennings; Hongmei Jiang; Zenglu Li; Gail McClure; Rick McMullen; Jason H. Moore; Bindu Nanduri; et al. (BioData Min., 2013)

Discovering dysregulated phenotype-related gene patterns. - Rami Alroobi; Saeed Salem (BCB, 2014)

Improving the effectiveness of test suite through mining historical data. - Jeff Anderson; Saeed Salem; Hyunsook Do (MSR, 2014)

Hybrid coexpression link similarity graph clustering for mining biological modules from multiple gene expression datasets. - Saeed Salem; Cagri Ozcaglar (BioData Min., 2014)

Mining maximal subnetworks from interaction network with node attributes. - Aditya Goparaju; Bassam Qormosh; Saeed Salem (BIBM, 2015)

Striving for Failure: An Industrial Case Study about Test Failure Prediction. - Jeff Anderson; Saeed Salem; Hyunsook Do (ICSE (2), 2015)

Experience report: Mining test results for reasons other than functional correctness. - Jeff Anderson; Hyunsook Do; Saeed Salem (ISSRE, 2015)

Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm. - Xiuzhen Huang; Steven F. Jennings; Barry Bruce; Alison Buchan; Liming Cai; Pengyin Chen; Carole L. Cramer; Weihua Guan; Uwe Hilgert; Hongmei Jiang; Zenglu Li; Gail McClure; et al. (BioData Min., 2015)

Mining representative maximal dense cohesive subnetworks. - Aditya Goparaju; Tyler Brazier; Saeed Salem (Netw. Model. Anal. Health Informatics Bioinform., 2015)

A Multithreaded Algorithm for Mining Maximal Cohesive Dense Modules from Interaction Networks with Gene Profiles. - Aditya Goparaju; Saeed Salem (BCB, 2016)

Customized Regression Testing Using Telemetry Usage Patterns. - Jeff Anderson; Hyunsook Do; Saeed Salem (ICSME, 2016)

Classifying gene coexpression networks using state subnetworks. - Bassam Qormosh; Eihab El Radie; Saeed Salem (BIBM, 2017)

Mining quasi frequent coexpression subnetworks. - Eihab El Radie; Saeed Salem (BIBM, 2017)

A parallel algorithm for mining maximal frequent subgraphs. - Eihab El Radie; Saeed Salem (BIBM, 2017)

Template edge similarity graph clustering for mining multiple gene expression datasets. - Saeed Salem (Int. J. Data Min. Bioinform., 2017)

A Linear Delay Linear Space Algorithm for Enumeration of All Connected Induced Subgraphs. - Mohammed Alokshiya; Saeed Salem; Fidaa Abed (BCB, 2018)

Subgraph-Based Adversarial Examples Against Graph-Based IoT Malware Detection Systems. - Ahmed Abusnaina; Hisham Alasmary; Mohammed Abuhamad; Saeed Salem; DaeHun Nyang; Aziz Mohaisen (CSoNet, 2019)

A linear delay algorithm for enumerating all connected induced subgraphs. - Mohammed Alokshiya; Saeed Salem; Fidaa Abed (BMC Bioinform., 2019)

On the use of usage patterns from telemetry data for test case prioritization. - Jeff Anderson; Maral Azizi; Saeed Salem; Hyunsook Do (Inf. Softw. Technol., 2019)

Efficiently mining rich subgraphs from vertex-attributed graphs. - Riyad Hakim; Saeed Salem (BCB, 2020)

Language and Obfuscation Oblivious Source Code Authorship Attribution. - Sarim Zafar; Muhammad Usman Sarwar; Saeed Salem; Muhammad Zubair Malik (IEEE Access, 2020)

A Deep Learning-based Fine-grained Hierarchical Learning Approach for Robust Malware Classification. - Ahmed Abusnaina; Mohammed Abuhamad; Hisham Alasmary; Afsah Anwar; Rhongho Jang; Saeed Salem; DaeHun Nyang; David Mohaisen (CoRR, 2020)

Measuring the Cost of Software Vulnerabilities. - Afsah Anwar; Aminollah Khormali; Jinchun Choi; Hisham Alasmary; Saeed Salem; DaeHun Nyang; David Mohaisen (EAI Endorsed Trans. Security Safety, 2020)

RASMA: a reverse search algorithm for mining maximal frequent subgraphs. - Saeed Salem; Mohammed Alokshiya; Mohammad Al Hasan (BioData Min., 2021)

Do Content Management Systems Impact the Security of Free Content Websites? - Mohamed Alqadhi; Abdulrahman Alabduljabbar; Kyle Thomas; Saeed Salem; DaeHun Nyang; David Mohaisen (CSoNet, 2022)

Do Content Management Systems Impact the Security of Free Content Websites? A Correlation Analysis. - Mohamed Alqadhi; Abdulrahman Alabduljabbar; Kyle Thomas; Saeed Salem; DaeHun Nyang; David Mohaisen (CoRR, 2022)

DL-FHMC: Deep Learning-Based Fine-Grained Hierarchical Learning Approach for Robust Malware Classification. - Ahmed Abusnaina; Mohammed Abuhamad; Hisham Alasmary; Afsah Anwar; Rhongho Jang; Saeed Salem; DaeHun Nyang; David Mohaisen (IEEE Trans. Dependable Secur. Comput., 2022)

Understanding the Country-Level Security of Free Content Websites and their Hosting Infrastructure. - Mohamed Alqadhi; Ali Alkinoon; Saeed Salem; David Mohaisen (DSAA, 2023)

A Dynamic Redeployment System for Mobile Ambulances in Qatar, Empowered by Deep Reinforcement Learning. - Reem Tluli; Ahmed Badawy; Saeed Salem; Mohamed Hardan; Sailesh Chauhan; Guillaume Alinier (IWCMC, 2024)

Exposing the Limitations of Machine Learning for Malware Detection Under Concept Drift. - Ahmed Abusnaina; Afsah Anwar; Muhammad Saad 001; Abdulrahman Alabduljabbar; Rhongho Jang; Saeed Salem; David Mohaisen (WISE (2), 2024)

Industry-Specific Vulnerability Assessment. - Mohammed Alkinoon; Hattan Althebeiti; Ali Alkinoon; Manar Mohaisen; Saeed Salem; David Mohaisen (WISE (5), 2024)

Mining contextually meaningful subgraphs from a vertex-attributed graph. - Riyad Hakim; Saeed Salem (BMC Bioinform., 2024)

Semantics-Preserving Node Injection Attacks Against GNN-Based ACFG Malware Classifiers. - Dylan Zapzalka; Saeed Salem; David Mohaisen (IEEE Trans. Dependable Secur. Comput., 2025)

Enhancing Vulnerability Reports with Automated and Augmented Description Summarization. - Hattan Althebeiti; Mohammed Alkinoon; Manar Mohaisen; Saeed Salem; DaeHun Nyang; David Mohaisen (CoRR, 2025)

A Comprehensive Analysis of Evolving Permission Usage in Android Apps: Trends, Threats, and Ecosystem Insights. - Ali Alkinoon; Trung Cuong Dang; Ahod Alghuried; Abdulaziz Alghamdi; Soohyeon Choi; Manar Mohaisen; An Wang 002; Saeed Salem; David Mohaisen (CoRR, 2025)