Stabilization of Inverted Pendulum by the Genetic Algorithm. - Sigeru Omatu 001; Safaai Deris (International Conference on Evolutionary Computation, 1996)

A Constraint-Directed Genetic Algorithm for University Timetable Planning. - Safaai Deris; Sigeru Omatu 001; Hiroshi Ohta; Puteh Saad (ICONIP (1), 1997)

Object-oriented constraint logic programming for timetable planning. - Safaai Deris; Sigeru Omatu 001; Hiroshi Ohta; Pathiah Abd Samat (Int. J. Syst. Sci., 1997)

Ship maintenance scheduling by genetic algorithm and constraint-based reasoning. - Safaai Deris; Sigeru Omatu 001; Hiroshi Ohta; Shaharudin Kutar; Pathiah Abd Samat (Eur. J. Oper. Res., 1999)

Timetable planning using the constraint-based reasoning. - Safaai Deris; Sigeru Omatu 001; Hiroshi Ohta (Comput. Oper. Res., 2000)

Rough Set on Trademark Images for Neural Network Classifier. - Puteh Saad; Siti Mariyam Hj. Shamsuddin; Safaai Deris; Dzulkifli Bin Mohamad (Int. J. Comput. Math., 2002)

Features Extraction For Protein Homology Detection Using Hidden Markov Models Combining Scores. - Nazar M. Zaki; Safaai Deris; Rosli Md. Illias (Int. J. Comput. Intell. Appl., 2004)

Towards a Reusable and Maintainable Multiagent System Engineering (MaSE) Methodology. - Hany H. Ammar; Safaai Deris; Radziah Mohamad (IC-AI, 2005)

Combining Three Scoring Algorithms for Representing Protein Sequence. - Nazar M. Zaki; Safaai Deris (IC-AI, 2005)

A Hybrid of Genetic Algorithm and Support Vector Machine for Features Selection and Classification of Gene Expression Microarray. - Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias (Int. J. Comput. Intell. Appl., 2005)

Combining Artificial Neural Networks and GOR-V Information Theory to Predict Protein Secondary Structure from Amino Acid Sequences. - Saad Osman Abdalla Subair; Safaai Deris (Int. J. Intell. Inf. Technol., 2005)

Enhancements of PECOS Embedded Real-Time Component Model for Autonomous Mobile Robot Application. - Dayang N. A. Jawawi; Safaai Deris; Rosbi Bin Mamat (AICCSA, 2006)

Agent Design Patterns Framework for MaSE/POAD Methodology. - Radziah Mohamad; Safaai Deris; Hany H. Ammar (AICCSA, 2006)

Protein Secondary Structure Reduction Methods Significantly Affect Prediction Accuracy. - Saad Osman Abdalla Subair; Safaai Deris (AICCSA, 2006)

Protein Secondary Structure Prediction Accuracy versus Reduction Methods. - Saad Osman Abdalla Subair; Safaai Deris (CDES, 2006)

Towards estimating gene network using structure learning. - Suhaila Zainudin; Safaai Deris (Computational Intelligence, 2006)

Web-Based Support System for Flood Response Operation. - Norliza Katuk; Ku Ruhana Ku-Mahamud; Norita Md Norwawi; Safaai Deris (IAT Workshops, 2006)

Pattern-Oriented Design for Multi-Agent System : A Process Framework. - Radziah Mohamad; Safaai Deris; Hany H. Ammar (Software Engineering Research and Practice, 2006)

SubSS: A Protein-Protein Interaction Detection Tool. - Nazar M. Zaki; Safaai Deris; Saleh Alwahaishi (ACIS-ICIS, 2007)

Blind Test Is A Pragmatic Test for A New Protein Secondary Structure Classifier. - Saad Osman Abdalla Subair; Safaai Deris (BIOCOMP, 2007)

Towards Evaluation of Inferred Gene Network. - Suhaila Zainudin; Safaai Deris (ICCSA Workshops, 2007)

A model for gene selection and classification of gene expression data. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Siti Zaiton Mohd Hashim (Artif. Life Robotics, 2007)

Software Reuse for Mobile Robot Applications Through Analysis Patterns. - Dayang N. A. Jawawi; Safaai Deris; Rosbi Bin Mamat (Int. Arab J. Inf. Technol., 2007)

Pattern-Oriented Design for Multi-Agent System: A Conceptual Model. - Radziah Mohamad; Safaai Deris; Hany H. Ammar (J. Object Technol., 2007)

An Approach Using Hybrid Methods to Select Informative Genes from Microarray Data for Cancer Classification. - Mohd Saberi Mohamad; Sigeru Omatu 001; Michifumi Yoshioka; Safaai Deris (Asia International Conference on Modelling and Simulation, 2008)

A novel method for protein 3D-structure similarity measure based on n-gram modeling. - Jafar Razmara; Safaai Bin Deris (BIBE, 2008)

Comparative Evaluation of Change Propagation Approaches towards Resilient Software Evolution. - Noraini Ibrahim; Wan M. N. Wan-Kadir; Safaai Deris (ICSEA, 2008)

The Concept of Bio-fitness in Bio-inspired Computational Metaphor Abstraction. - Anjum Iqbal; Mohd Aizaini Maarof; Safaai Deris (IMTIC, 2008)

Rescheduling for Manufacturing Based on Ontology and Problem Solving Method. - Muhammad Firdaus Mustapha; Safaai Bin Deris (ISDA (2), 2008)

Combining Clustering and Bayesian Network for Gene Network Inference. - Suhaila Zainudin; Safaai Deris (ISDA (2), 2008)

A Recursive Genetic Algorithm to Automatically Select Genes for Cancer Classification. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (IWPACBB, 2008)

Early-Life Cycle Reuse Approach for Component-Based Software of Autonomous Mobile Robot System. - Dayang N. A. Jawawi; Safaai Deris; Rosbi Bin Mamat (SNPD, 2008)

Autonomous Notification and Situation Reporting for Flood Disaster Management. - Ku Ruhana Ku-Mahamud; Norita Md Norwawi; Norliza Katuk; Safaai Deris (Comput. Inf. Sci., 2008)

A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences. - Razib M. Othman; Safaai Deris; Rosli Md. Illias (J. Biomed. Informatics, 2008)

Requirements Identification and Representation in Software Product Line. - Shahliza Abd Halim; Dayang Norhayati Abang Jawawi; Safaai Deris (APSEC, 2009)

Propagating Requirement Change into Software High Level Designs towards Resilient Software Evolution. - Noraini Ibrahim; Wan M. N. Wan-Kadir; Safaai Deris (APSEC, 2009)

Constraint-Based Genetic Algorithms for Machine Requirement of Semiconductor Assembly Industry: A Proposed Framework. - Umi Kalsom Yusof; Safaai Deris (Asia International Conference on Modelling and Simulation, 2009)

University course timetable planning using hybrid particle swarm optimization. - Ho Sheau Fen Irene; Safaai Deris; Siti Zaiton Mohd Hashim (GEC Summit, 2009)

An Iterative GASVM-Based Method: Gene Selection and Classification of Microarray Data. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (IWANN (2), 2009)

An Improved Binary Particle Swarm Optimisation for Gene Selection in Classifying Cancer Classes. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka; Anazida Binti Zainal (IWANN (2), 2009)

Text-Based Protein Structure Modeling for Structure Comparison. - Jafar Razmara; Safaai Bin Deris; Sepideh Parvizpour (SoCPaR, 2009)

A multi-objective strategy in genetic algorithms for gene selection of gene expression data. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Muhammad Faiz Misman; Michifumi Yoshioka (Artif. Life Robotics, 2009)

Selecting informative genes from microarray data by using hybrid methods for cancer classification. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Muhammad Faiz Misman; Michifumi Yoshioka (Artif. Life Robotics, 2009)

Gene subset selection using an iterative approach based on genetic algorithms. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (Artif. Life Robotics, 2009)

Particle swarm optimization for gene selection in classifying cancer classes. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (Artif. Life Robotics, 2009)

A New Computational Framework for Gene Expression Clustering. - Shahreen Kasim; Safaai Deris; Razib M. Othman (ADMA (1), 2010)

Selecting Genes from Gene Expression Data by using an Enhancement of Binary Particle Swarm Optimization for Cancer Classification. - Mohd Saberi Mohamad; Sigeru Omatu 001; Michifumi Yoshioka; Safaai Deris (ICAART (1), 2010)

Protein Structure Modeling in Two-Level Topology Strings for Structure Comparison. - Jafar Razmara; Safaai Bin Deris; Sepideh Parvizpour (SITIS, 2010)

Particle swarm optimization with a modified sigmoid function for gene selection from gene expression data. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (Artif. Life Robotics, 2010)

Machine Loading Optimization in Flexible Manufacturing System Using a Hybrid of Bio-inspired and Musical-Composition Approach. - Umi Kalsom Yusof; Rahmat Budiarto; Ibrahim Venkat; Safaai Deris (BIC-TA, 2011)

An improved local best searching in Particle Swarm Optimization using Differential Evolution. - Afnizanfaizal Abdullah; Safaai Deris; Siti Zaiton Mohd Hashim; Mohd Saberi Mohamad; Satya Nanda Vel Arjunan (HIS, 2011)

Parameter Estimation for Simulation of Glycolysis Pathway by Using an Improved Differential Evolution. - Chuii Khim Chong; Mohd Saberi Mohamad; Safaai Deris; Yee Wen Choon; Lian En Chai (KTW, 2011)

A Novel Image Segmentation Enhancement Technique based on Active Contour and Topological Alignments - Ashraf A. Aly; Safaai Bin Deris; Nazar Zaki (CoRR, 2011)

Web Services Non-Functional Classification to Enhance Discovery Speed - Mamoun M. Jamous; Safaai Bin Deris (CoRR, 2011)

Synergy network based inference for breast cancer metastasis. - Farzana Kabir Ahmad; Safaai Deris; Mohd. Syazwan Abdullah (WCIT, 2011)

A Modified Binary Particle Swarm Optimization for Selecting the Small Subset of Informative Genes From Gene Expression Data. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (IEEE Trans. Inf. Technol. Biomed., 2011)

A New Hybrid Firefly Algorithm for Complex and Nonlinear Problem. - Afnizanfaizal Abdullah; Safaai Deris; Mohd Saberi Mohamad; Siti Zaiton Mohd Hashim (DCAI, 2012)

Inferring Gene Regulatory Networks from Gene Expression Data by a Dynamic Bayesian Network-Based Model. - Lian En Chai; Mohd Saberi Mohamad; Safaai Deris; Chuii Khim Chong; Yee Wen Choon; Zuwairie Ibrahim; Sigeru Omatu 001 (DCAI, 2012)

Using an Improved Differential Evolution Algorithm for Parameter Estimation to Simulate Glycolysis Pathway. - Chuii Khim Chong; Mohd Saberi Mohamad; Safaai Deris; Mohd Shahir Shamsir; Afnizanfaizal Abdullah; Yee Wen Choon; Lian En Chai; Sigeru Omatu 001 (DCAI, 2012)

Identifying Gene Knockout Strategies Using a Hybrid of Bees Algorithm and Flux Balance Analysis for in Silico Optimization of Microbial Strains. - Yee Wen Choon; Mohd Saberi Mohamad; Safaai Deris; Chuii Khim Chong; Lian En Chai; Zuwairie Ibrahim; Sigeru Omatu 001 (DCAI, 2012)

A Hybrid of SVM and SCAD with Group-Specific Tuning Parameter for Pathway-Based Microarray Analysis. - Muhammad Faiz Misman; Mohd Saberi Mohamad; Safaai Deris; Raja Nurul Mardhiah Raja Mohamad; Siti Zaiton Mohd Hashim; Sigeru Omatu 001 (DCAI, 2012)

Automated biological pathway knowledge retrieval based on semantic web services composition and AI Planning. - Muhammad Akmal bin Remli; Safaai Bin Deris (CAMP, 2012)

TS-AMIR: a topology string alignment method for intensive rapid protein structure comparison. - Jafar Razmara; Safaai Bin Deris; Sepideh Parvizpour (Algorithms Mol. Biol., 2012)

Improved Differential Evolution Algorithm for Parameter Estimation to Improve the Production of Biochemical Pathway. - Chuii Khim Chong; Mohd Saberi Mohamad; Safaai Deris; Mohd Shahir Shamsir; Yee Wen Choon; Lian En Chai (Int. J. Interact. Multim. Artif. Intell., 2012)

The inference of breast cancer metastasis through gene regulatory networks. - Farzana Kabir Ahmad; Safaai Deris; N. H. Othman (J. Biomed. Informatics, 2012)

Using Bees Hill Flux Balance Analysis (BHFBA) for in silico Microbial Strain Optimization. - Yee Wen Choon; Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias; Lian En Chai; Chuii Khim Chong (ACIIDS (1), 2013)

Multiple Gene Sets for Cancer Classification Using Gene Range Selection Based on Random Forest. - Kohbalan Moorthy; Mohd Saberi Mohamad; Safaai Deris (ACIIDS (1), 2013)

Identifying Minimal Genomes and Essential Genes in Metabolic Model Using Flux Balance Analysis. - Abdul Hakim Mohamed Salleh; Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias (ACIIDS (1), 2013)

Inferring E. coli SOS Response Pathway from Gene Expression Data Using IST-DBN with Time Lag Estimation. - Lian En Chai; Mohd Saberi Mohamad; Safaai Deris; Chuii Khim Chong; Yee Wen Choon (BDI, 2013)

Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis (BHFBA) for Improving the Production of Ethanol in Bacillus Subtilis. - Yee Wen Choon; Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias; Lian En Chai; Chuii Khim Chong (BDI, 2013)

A Hybrid of Artificial Bee Colony and Flux Balance Analysis for Identifying Optimum Knockout Strategies for Producing High Yields of Lactate in Echerichia Coli. - Seet Sun Lee; Yee Wen Choon; Lian En Chai; Chuii Khim Chong; Safaai Deris; Rosli Md. Illias; Mohd Saberi Mohamad (BDI, 2013)

Inferring Gene Networks from Gene Expression Data Using Dynamic Bayesian Network with Different Scoring Metric Approaches. - Masarrah Abdul Mutalib; Lian En Chai; Chuii Khim Chong; Yee Wen Choon; Safaai Deris; Rosli Md. Illias; Mohd Saberi Mohamad (BDI, 2013)

Using Particle Swarm Optimization for Estimating Kinetics Parameters on Essential Amino Acid Production of Arabidopsis Thaliana. - Siew Teng Ng; Chuii Khim Chong; Yee Wen Choon; Lian En Chai; Safaai Deris; Rosli Md. Illias; Mohd Shahir Shamsir; Mohd Saberi Mohamad (BDI, 2013)

Using Ant Colony Optimization (ACO) on Kinetic Modeling of the Acetoin Production in Lactococcus Lactis C7. - Nor Farhah Binti Saidin; Chuii Khim Chong; Yee Wen Choon; Lian En Chai; Safaai Deris; Rosli Md. Illias; Mohd Shahir Shamsir; Mohd Saberi Mohamad (BDI, 2013)

Prediction of Vanillin Production in Yeast Using a Hybrid of Continuous Bees Algorithm and Flux Balance Analysis (CBAFBA). - Leang Huat Yin; Yee Wen Choon; Lian En Chai; Chuii Khim Chong; Safaai Deris; Rosli Md. Illias; Mohd Saberi Mohamad (BDI, 2013)

Modelling Gene Networks by a Dynamic Bayesian Network-Based Model with Time Lag Estimation. - Lian En Chai; Mohd Saberi Mohamad; Safaai Deris; Chuii Khim Chong; Yee Wen Choon (PAKDD Workshops, 2013)

Threonine Biosynthesis Pathway Simulation Using IBMDE with Parameter Estimation. - Chuii Khim Chong; Mohd Saberi Mohamad; Safaai Deris; Mohd Shahir Shamsir; Yee Wen Choon; Lian En Chai (PAKDD Workshops, 2013)

Identifying Gene Knockout Strategy Using Bees Hill Flux Balance Analysis (BHFBA) for Improving the Production of Succinic Acid and Glycerol in Saccharomyces cerevisiae. - Yee Wen Choon; Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias; Lian En Chai; Chuii Khim Chong (PAKDD Workshops, 2013)

A Hybrid of SVM and SCAD with Group-Specific Tuning Parameters in Identification of Informative Genes and Biological Pathways. - Muhammad Faiz Misman; Weng Howe Chan; Mohd Saberi Mohamad; Safaai Deris (PAKDD Workshops, 2013)

A Constraint and Rule in an Enhancement of Binary Particle Swarm Optimization to Select Informative Genes for Cancer Classification. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka (PAKDD Workshops, 2013)

Multiclass Prediction for Cancer Microarray Data Using Various Variables Range Selection Based on Random Forest. - Kohbalan Moorthy; Mohd Saberi Mohamad; Safaai Deris (PAKDD Workshops, 2013)

Parameter Estimation Using Improved Differential Evolution (IDE) and Bacterial Foraging Algorithm to Model Tyrosine Production in Mus Musculus (Mouse). - Jia Xing Yeoh; Chuii Khim Chong; Yee Wen Choon; Lian En Chai; Safaai Deris; Rosli Md. Illias; Mohd Saberi Mohamad (PAKDD Workshops, 2013)

An artificial immune system for solving production scheduling problems: a review. - Ahmad Shahrizal Muhamad; Safaai Deris (Artif. Intell. Rev., 2013)

An enhancement of binary particle swarm optimization for gene selection in classifying cancer classes. - Mohd Saberi Mohamad; Sigeru Omatu 001; Safaai Deris; Michifumi Yoshioka; Afnizanfaizal Abdullah; Zuwairie Ibrahim (Algorithms Mol. Biol., 2013)

Multi-stage filtering for improving confidence level and determining dominant clusters in clustering algorithms of gene expression data. - Shahreen Kasim; Safaai Deris; Razib M. Othman (Comput. Biol. Medicine, 2013)

A context evaluation approach for structural comparison of proteins using cross entropy over n-gram modelling. - Jafar Razmara; Safaai Bin Deris; Sepideh Parvizpour (Comput. Biol. Medicine, 2013)

A gene knockout strategy for succinate production using a hybrid algorithm of bees algorithm and minimization of metabolic adjustment. - Ching Lee Koo; Mohd Saberi Mohamad; Sigeru Omatu 001; Abdul Hakim Mohamed Salleh; Safaai Deris; Michifumi Yoshioka (GrC, 2014)

Inferring gene regulatory networks from perturbed gene expression data using a dynamic Bayesian network with a Markov Chain Monte Carlo algorithm. - Swee Thing Low; Mohd Saberi Mohamad; Sigeru Omatu 001; Lian En Chai; Safaai Deris; Michifumi Yoshioka (GrC, 2014)

Requirements Engineering of Malaysia Radiation and Nuclear Emergency Plan Simulator. - Amy Hamijah Ab. Hamid; Mohd Zaidi Abd Rozan; Roliana Ibrahim; Safaai Deris; Ali Selamat; Muhd. Noor Muhd Yunus (SoMeT, 2014)

Requirements Engineering of Malaysia's Radiation and Nuclear Emergency Plan Simulator. - Amy Hamijah binti Ab. Hamid; Mohd Zaidi Abd Rozan; Roliana Ibrahim; Safaai Deris; Ali Selamat; Muhd. Noor Muhd Yunus (SoMeT (Selected Papers), 2014)

Systematic Mapping Study in Automatic Test Case Generation. - Shayma Mustafa Mohi-Aldeen; Safaai Deris; Radziah Mohamad (SoMeT, 2014)

Identification of gene knockout strategies using a hybrid of an ant colony optimization algorithm and flux balance analysis to optimize microbial strains. - Shi Jing Lu; Abdul Hakim Mohamed Salleh; Mohd Saberi Mohamad; Safaai Deris; Sigeru Omatu 001; Michifumi Yoshioka (Comput. Biol. Chem., 2014)

A review on the computational approaches for gene regulatory network construction. - Lian En Chai; Swee Kuan Loh; Swee Thing Low; Mohd Saberi Mohamad; Safaai Deris; Zalmiyah Zakaria (Comput. Biol. Medicine, 2014)

A hybrid of ant colony optimization and minimization of metabolic adjustment to improve the production of succinic acid in Escherichia coli. - Shiue Kee Chong; Mohd Saberi Mohamad; Abdul Hakim Mohamed Salleh; Yee Wen Choon; Chuii Khim Chong; Safaai Deris (Comput. Biol. Medicine, 2014)

An improved differential evolution algorithm for enhancing biochemical pathways simulation and production. - Chuii Khim Chong; Mohd Saberi Mohamad; Safaai Deris; Mohd Shahir Shamsir; Afnizanfaizal Abdullah (Int. J. Data Min. Bioinform., 2014)

A hybrid of bees algorithm and flux balance analysis (BAFBA) for the optimisation of microbial strains. - Yee Wen Choon; Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias (Int. J. Data Min. Bioinform., 2014)

A group-specific tuning parameter for hybrid of SVM and SCAD in identification of informative genes and pathways. - Muhammad Faiz Misman; Mohd Saberi Mohamad; Safaai Deris; Siti Zaiton Mohd Hashim (Int. J. Data Min. Bioinform., 2014)

Metabolites production improvement by identifying minimal genomes and essential genes using flux balance analysis. - Abdul Hakim Mohamed Salleh; Mohd Saberi Mohamad; Safaai Deris; Rosli Md. Illias (Int. J. Data Min. Bioinform., 2015)

Investigation of the Effects of Imputation Methods for Gene Regulatory Networks Modelling Using Dynamic Bayesian Networks. - Sin Yi Lim; Mohd Saberi Mohamad; Lian En Chai; Safaai Deris; Weng Howe Chan; Sigeru Omatu 001; Juan Manuel Corchado; Muhammad Farhan Sjaugi; Muhammad Mahfuz Zainuddin; Gopinathaan Rajamohan; Zuwairie Ibrahim; Zulkifli Md. Yusof (DCAI, 2016)

Exploring the High Performance Computing-Enablement of a Suite of Gene-Knockout Based Genetic Engineering Applications. - Zhenya Li; Richard O. Sinnott; Yee Wen Choon; Muhammad Farhan Sjaugi; Mohd Saberi Mohamad; Safaai Deris; Suhaimi Napis; Sigeru Omatu 001; Juan Manuel Corchado; Zuwairie Ibrahim; Zulkifli Md. Yusof (PACBB, 2016)

A Hybrid of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production. - Nor Syahirah Abdul Wahid; Mohd Saberi Mohamad; Abdul Hakim Mohamed Salleh; Safaai Deris; Weng Howe Chan; Sigeru Omatu 001; Juan Manuel Corchado; Muhammad Farhan Sjaugi; Zuwairie Ibrahim; Zulkifli Md. Yusof (PACBB, 2016)

Application of Negative Selection Algorithm (NSA) for test data generation of path testing. - Shayma Mustafa Mohi-Aldeen; Radziah Mohamad; Safaai Deris (Appl. Soft Comput., 2016)

Identification of informative genes and pathways using an improved penalized support vector machine with a weighting scheme. - Weng Howe Chan; Mohd Saberi Mohamad; Safaai Deris; Nazar Zaki; Shahreen Kasim; Sigeru Omatu 001; Juan Manuel Corchado; Hany Al Ashwal (Comput. Biol. Medicine, 2016)

An improved gSVM-SCADL2 with firefly algorithm for identification of informative genes and pathways. - Weng Howe Chan; Mohd Saberi Mohamad; Safaai Deris; Juan Manuel Corchado; Sigeru Omatu 001; Zuwairie Ibrahim; Shahreen Kasim (Int. J. Bioinform. Res. Appl., 2016)

Classification of Colorectal Cancer Using Clustering and Feature Selection Approaches. - Hui Wen Nies; Kauthar Mohd Daud; Muhammad Akmal bin Remli; Mohd Saberi Mohamad; Safaai Deris; Sigeru Omatu 001; Shahreen Kasim; Ghazali Sulong (PACBB, 2017)

K-Means Clustering with Infinite Feature Selection for Classification Tasks in Gene Expression Data. - Muhammad Akmal bin Remli; Kauthar Mohd Daud; Hui Wen Nies; Mohd Saberi Mohamad; Safaai Deris; Sigeru Omatu 001; Shahreen Kasim; Ghazali Sulong (PACBB, 2017)

An improved hybrid of particle swarm optimization and the gravitational search algorithm to produce a kinetic parameter estimation of aspartate biochemical pathways. - Ahmad Muhaimin Ismail; Mohd Saberi Mohamad; Hairudin Abdul Majid; Khairul Hamimah Abas; Safaai Deris; Nazar Zaki; Siti Zaiton Mohd Hashim; Zuwairie Ibrahim; Muhammad Akmal bin Remli (Biosyst., 2017)

An enhanced scatter search with combined opposition-based learning for parameter estimation in large-scale kinetic models of biochemical systems. - Muhammad Akmal bin Remli; Safaai Deris; Mohd Saberi Mohamad; Sigeru Omatu 001; Juan Manuel Corchado (Eng. Appl. Artif. Intell., 2017)

Automated path testing using the negative selection algorithm. - Shayma Mustafa Mohi-Aldeen; Radziah Mohamad; Safaai Deris (Int. J. Comput. Vis. Robotics, 2017)

Samira-VP: A simple protein alignment method with rechecking the alphabet vector positions. - Samira Fotoohifiroozabadi; Mohd Saberi Mohamad; Safaai Deris (J. Bioinform. Comput. Biol., 2017)

Parameter Estimation of Essential Amino Acids in Arabidopsis thaliana Using Hybrid of Bees Algorithm and Harmony Search. - Mei Yee Aw; Mohd Saberi Mohamad; Chuii Khim Chong; Safaai Deris; Muhammad Akmal bin Remli; Mohd Arfian Ismail; Juan Manuel Corchado; Sigeru Omatu 001 (PACBB, 2018)

A hybrid of Cuckoo Search and Minimization of Metabolic Adjustment to optimize metabolites production in genome-scale models. - Muhammad Azharuddin Arif; Mohd Saberi Mohamad; Muhammad Shafie Abdul Latif; Safaai Deris; Muhammad Akmal bin Remli; Kauthar Mohd Daud; Zuwairie Ibrahim; Sigeru Omatu 001; Juan Manuel Corchado Rodríguez (Comput. Biol. Medicine, 2018)

Requirements engineering of Malaysian radiological medical emergency response simulator. - Amy Hamijah Ab. Hamid; Mohd Zaidi Abd Rozan; Roliana Ibrahim; Safaai Deris; Ali Selamat; Muhd. Noor Muhd Yunus (J. Inf. Telecommun., 2018)

NAHAL-Flex: A Numerical and Alphabetical Hinge Detection Algorithm for Flexible Protein Structure Alignment. - Samira Fotoohifiroozabadi; Mohd Saberi Mohamad; Safaai Deris (IEEE ACM Trans. Comput. Biol. Bioinform., 2018)

A non-dominated sorting Differential Search Algorithm Flux Balance Analysis (ndsDSAFBA) for in silico multiobjective optimization in identifying reactions knockout. - Kauthar Mohd Daud; Mohd Saberi Mohamad; Zalmiyah Zakaria; Rohayanti Hassan; Zuraini Ali Shah; Safaai Deris; Zuwairie Ibrahim; Suhaimi Napis; Richard O. Sinnott (Comput. Biol. Medicine, 2019)

Cooperative enhanced scatter search with opposition-based learning schemes for parameter estimation in high dimensional kinetic models of biological systems. - Muhammad Akmal bin Remli; Mohd Saberi Mohamad; Safaai Deris; Azurah A. Samah; Sigeru Omatu 001; Juan M. Corchado (Expert Syst. Appl., 2019)