Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge. - Michael Biehl; Peter J. Sadowski; Gyan Bhanot; Erhan Bilal; Adel Dayarian; Pablo Meyer 001; Raquel Norel; Kahn Rhrissorrakrai; Michael D. Zeller; Sahand Hormoz (Bioinform., 2015)

Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge. - Adel Dayarian; Roberto Romero; Zhiming Wang; Michael Biehl; Erhan Bilal; Sahand Hormoz; Pablo Meyer 001; Raquel Norel; Kahn Rhrissorrakrai; Gyan Bhanot; Feng Luo 001; Adi L. Tarca (Bioinform., 2015)

Inter-species inference of gene set enrichment in lung epithelial cells from proteomic and large transcriptomic datasets. - Sahand Hormoz; Gyan Bhanot; Michael Biehl; Erhan Bilal; Pablo Meyer 001; Raquel Norel; Kahn Rhrissorrakrai; Adel Dayarian (Bioinform., 2015)

An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells. - Shabnam Sahay; Shishir Adhikari; Sahand Hormoz; Shaon Chakrabarti (Bioinform., 2023)

An efficient solution to Hidden Markov Models on trees with coupled branches. - Farzan Vafa; Sahand Hormoz (CoRR, 2024)

Improving Graph Neural Networks by Learning Continuous Edge Directions. - Seong Ho Pahng; Sahand Hormoz (ICLR, 2025)