Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics. - John C. Martin; Sahar Abubucker; Todd Wylie; Yong Yin; Zhengyuan Wang; Makedonka Dautova Mitreva (Nucleic Acids Res., 2009)

Nematode.net update 2011: addition of data sets and tools featuring next-generation sequencing data. - John C. Martin; Sahar Abubucker; Esley Heizer; Christina M. Taylor; Makedonka Dautova Mitreva (Nucleic Acids Res., 2012)

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome. - Sahar Abubucker; Nicola Segata; Johannes Goll; Alyxandria M. Schubert; Jacques Izard; Brandi L. Cantarel; Beltran Rodriguez-Mueller; Jeremy Zucker; Mathangi Thiagarajan; Bernard Henrissat; Owen White; Scott T. Kelley; et al. (PLoS Comput. Biol., 2012)