Active Contour for Overlap Resolution using Watershed BASED initialization (ACOReW): Applications to histopathology. - Sahirzeeshan Ali; Anant Madabhushi (ISBI, 2011)

Adaptive Energy Selective Active Contour with Shape Priors for Nuclear Segmentation and Gleason Grading of Prostate Cancer. - Sahirzeeshan Ali; Robert Veltri; Jonathan I. Epstein; Christhunesa Christudass; Anant Madabhushi (MICCAI (1), 2011)

Segmenting multiple overlapping objects via a hybrid active contour model incorporating shape priors: applications to digital pathology. - Sahirzeeshan Ali; Anant Madabhushi (Image Processing, 2011)

An Integrated Region-, Boundary-, Shape-Based Active Contour for Multiple Object Overlap Resolution in Histological Imagery. - Sahirzeeshan Ali; Anant Madabhushi (IEEE Trans. Medical Imaging, 2012)

Co-occurring gland tensors in localized cluster graphs: Quantitative histomorphometry for predicting biochemical recurrence for intermediate grade prostate cancer. - George Lee 002; Rachel Sparks; Sahirzeeshan Ali; Anant Madabhushi; Michael D. Feldman; Stephen R. Master; Natalie Shih; John Tomaszewski 001 (ISBI, 2013)

Spatially Aware Cell Cluster(SpACCl) Graphs: Predicting Outcome in Oropharyngeal p16+ Tumors. - Sahirzeeshan Ali; James Lewis; Anant Madabhushi (MICCAI (1), 2013)

Variable Importance in Nonlinear Kernels (VINK): Classification of Digitized Histopathology. - Shoshana Ginsburg; Sahirzeeshan Ali; George Lee 002; Ajay Basavanhally; Anant Madabhushi (MICCAI (2), 2013)

Cell Orientation Entropy (COrE): Predicting Biochemical Recurrence from Prostate Cancer Tissue Microarrays. - George Lee 002; Sahirzeeshan Ali; Robert Veltri; Jonathan I. Epstein; Christhunesa Christudass; Anant Madabhushi (MICCAI (3), 2013)

Cell cluster graph for prediction of biochemical recurrence in prostate cancer patients from tissue microarrays. - Sahirzeeshan Ali; Robert Veltri; Jonathan A. Epstein; Christhunesa Christudass; Anant Madabhushi (Digital Pathology, 2013)

Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays. - Sahirzeeshan Ali; Robert Veltri; Jonathan I. Epstein; Christhunesa Christudass; Anant Madabhushi (Comput. Medical Imaging Graph., 2015)

Feature Importance in Nonlinear Embeddings (FINE): Applications in Digital Pathology. - Shoshana B. Ginsburg; George Lee 002; Sahirzeeshan Ali; Anant Madabhushi (IEEE Trans. Medical Imaging, 2016)